What’s going on in Lebanon, Missouri?

June 30, 2014 • 7:21 am

Last Tuesday, June 24, the Freedom from Religion Foundation (FFRF) sent its second letter to the Superintendent of the Lebanon (Missouri) R-III school district, asking them to respond to the FFRF’s previous letter about Principal Kevin Lowery’s prayer at the graduation ceremony at Lebanon High. (You can see Lowery’s prayer on YouTube here, which I now notice says “embedding disabled by request.” Now I wonder who made that request? No comments are allowed, either.)

The FFRF sent its first letter by snailmail and email on June 2, and I posted it.  Delivered to the Superintendent and all the members of the Lebanon school board, it was completely ignored. Although Lowery issued a notapology for his prayer, he claimed that nobody forced him to. At the request of the FFRF I won’t reproduce the second letter, as they want to give the school board time to respond. You will see it soon.

This is a no-brainer for the Lebanon school board: if they don’t issue a written statement saying that public prayer at Lebanon High School won’t take place again (apparently Lowery did this all the time), they will be sued.  I’ve already heard that the American Civil Liberties Union has some legal action in the works.  And I’m pretty sure that the requirement for such a suit—a “complainant,” a student or parent willing to join a lawsuit—will be found.  Given all this, and the cost of a losing suit for the Lebanon School District (for they will lose a lawsuit), they should accede to the FFRF’s reasonable request.

What we see here is a case of cognitive dissonance. The town of Lebanon is so soaked in Christianity, and the people so sure that they have the God-given (if not Constitutionally-given) right to pray in public, that they simply can’t look ahead and see the ruin that awaits them. That’s why they’re simply not responding. But if they think the ACLU or the FFRF will give up, they’re mistaken.

Meanwhile, at the American Family News Network’s site, One News Now (this is a Christian news organization), there’s a piece by Bob Kellogg, “You say I can’t pray? Well just watch me,” whose title tells it all.  It gives a brief precis of what happened at Lebanon High and then adds only positive comments on the school prayer:

Travis Weber, director of the Center for Religious Liberty at Family Research Council, offers his assessment of the principal’s actions.

“He basically was pointing out the ridiculous state of the law in this area – really, the prohibitions on any expression of faith in the public square, including schools,” he says.

According to Weber, a letter of complaint to the superintendent about Lowery’s comments was riddled with typos and errors. “Then they can’t even accurately cite the Declaration of Independence,” he laments. “It’s kind of ironic when you have them claiming to rest upon accuracy in the law and they make an error like that.”

Christian News Network quotes several individuals who were appreciative of Lowery’s remarks, complimenting him on his boldness and his encouragement to students – through his example – to stand up for what they believe.

Riddled with typos and errors? I’m baffled. I just read the letter quickly (read for yourself here), and I can’t see anything erroneous, though combing through it carefully might reveal a few errors. But why does that matter? As for the Declaration of Independence being misquoted, the quote used comes from Lowery, not the FFRF. As for accurately quoting the law, the FFRF correctly pointed out previous cases in which courts prohibited prayer at school-sponsored public events, including graduations.  Weber is simply avoiding the issue, and makes himself look silly in the process. But of course he’s a Christian and has to dissimulate about such things.

Here’s a sample of the 39 comments; surprisingly, there are some favoring the FFRF’s stand against religious intrusion into public schools. The third one is a hoot:

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Muslim indoctrination? What’s that about? I’m pretty sure that doesn’t occur in Lebanon.

And yay for this guy!

Screen shot 2014-06-30 at 7.38.09 AMOf course he was deluged with criticisms, including all those legal-savvy Lebanon residents who just know that Lowery’s act was legal.

Someone even claimed that Lowery didn’t go far enough—he was a wimp to utter a silent prayer!:

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But another person stood up for the Constitution, too:

Screen shot 2014-06-30 at 7.37.20 AM

The dogpile inevitably ensued:

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Rosa Parks? How dare these people equate their public-school prayers with civil rights? And Parks, committing an act of civil disobedience, took the penalty for her actions. Will the people of Lebanon take theirs?

I’ll close with a typical sentiment from the area:

Lord

 

This is a new bit of apologetics to me: The Argument from Supper.

 

 

 

 

 

Today’s footie

June 30, 2014 • 5:54 am

Here’s today’s schedule. Since I can watch only one game, perhaps it’ll be Deutschland vs. Algeria, though I’d like to see France and Nigeria,too. Whichever one I watch has, however, already been determined by the laws of physics.

There is no contest today for readers to guess winners, nor will there be another besides the Big Contest still in force (who plays in the final game, and who wins by what score), but please feel free to tender your predictions below, including scores.

Screen shot 2014-06-30 at 6.02.54 AM

Once again I suggest that penalty kicks are no way to end a tied football match. What’s the rationale for this? They could just add successive fifteen-minute overtimes until someone scores. In baseball, a game can go on for twenty or more innings in case of a tie (the standard length is nine innings). When a team wins that way, at least the game has been played all the way in the same way. Penalty kicks are unsatisfactory, for even readers who think they should be kept seem dissatisfied with games settled that way.

End of rant; what do I know?

Some fuzzy highlights of yesterday’s heartbreaker for Mexico, who lost 2-1 to Netherlands:

And Costa Rica’s victory over Greece (1-1 in regulation time and overtime; settled by penalty kicks). The first Costa Rican goal looked lame to me; the Greek keeper just stood there. But I didn’t watch the game.

Today’s Google Doodle suggests that they’re running out of ideas for animations, but we have more than a week to go!

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Chicago: panorama and baseball

June 30, 2014 • 4:37 am

This panorama of Chicago (above us only sky) was taken with my iPhone, as I didn’t have my camera. I had no idea it could take fisheye-lens-like pictures. This was taken from Promontory Point, a bit of land that sticks out into the lake near my place, and it affords a great view of the city (lower left):

Chicago clouds

This photo, also shot with my iPhone (I much prefer my point-and-shoot Panasonic Lumix!) was taken at the Cubs/Nationals game on Saturday.(I had to adjust the exposure in iPhoto). Wrigley Field is a classic ballpark, and you can see its friendly confines. I was with my old friend Sarah, who was in town for a wedding. The photo is significant because the last time Sarah and I went to a ballgame together was a Yankees/Red Sox game in Fenway Park in 1973. And it was at that game when the botfly in my head (acquired in Costa Rica) began emerging from my skull. Sarah was there to see it pop out of my head later that evening.

You can hear the whole botfly tale, if you haven’t already, on Robert Krulwich’s NPR show RadioLab (link here, story starts at  44:05). Krulwich interviews me but, unbenownst to me, also talked to Sarah. You can hear us both.

She is a diehard Oakland A’s fan and is wearing their team hat:

Sarah and JC

 

Americans don’t really like soccer; they like to WIN

June 29, 2014 • 4:23 pm

I’ve reverted to American terminology for this short post, for if I called it “Why Americans don’t really like football,” it would be confusing and, in the American vernacular, deeply wrong.

America is in the throes of a World Cup craze: every time the U.S. plays, people in the big cities forgather in bars, or in city parks with huge screens, and cheer on “Team USA.” Often their faces are painted red, white, and blue, and they wear the national colors.  That’s what they do in other countries, who also cheer on their teams. What’s so bad about that?

The bad thing is that many of these Americans, so it seems, care only about the USA winning an international competition, and couldn’t care less about the fact that this competition occurs once every four years, giving us the chance to see the world’s greatest national teams—and greatest players.

Evidence: I watch the NBC News every night (that and “60 Minutes” are pretty much the only television I watch), and lately I hope to see the World Cup highlights and scores. (I still haven’t looked up who won the Greece/Costa Rica game.) Tonight there was a substantial segment of the news devoted to the USA team, showing its practices, its fans (many of whom claim that we’ll “go all the way”), interviews with the coach, and previews of the game with Belgium on Tuesday.

Did they give the results of the two games played today? Nope. They didn’t involve the U.S., so who cares? Jebus!

Every reader who is a real soccer fan here knows that I love the game but don’t know much about it. I plan to learn, but it’s not easy when the games you watch have Spanish commentary (I speak German and some French, but that’s no help). But I still see soccer as the perfect sport for fans.  It’s fast-paced, you know when the game will end, and there are no annoying commercial breaks except at halftime. The athleticism is unparalleled, and a good goal is a thing of beauty, for, unlike a home run, it involves a complicated team choreography, like a dance.

Baseball and American football have their merits, of course, but they’re too damn slow (the baseball game I went to yesterday lasted 2.5 hours, and that was fast!). Football is brutal, and for some reason I just can’t get interested in basketball. And the World Cup, unlike the Superbowl or so-called “World” Series, is truly international. I love to see the strange names on the jerseys, and learn about the players, their peccadillos (like biting), and their performance on their regular teams.

One would think that many Americans share this feeling, and I hope they do. But watching Americans cheer for our national team, I think that foreigners’ feeling that we’re poised to join the soccer-loving countries of the world is premature. Yes, the kids play while Mom and Dad watch patiently from the sidelines, but by the time you get to the high school and college level, nobody cares. Who knows how Harvard’s soccer team does?

Maybe someday we’ll be as soccer-crazy as Brazil, France, or England, and that day can’t come too soon for me. But I wish we’d become a little less chauvinistic and a little more interested in how the rest of the world is doing. And I wish they’d report the damn scores on the national news. It takes all of 30 seconds to say that the Dutch beat Mexico 2-1 and Costa Rica beat Greece 5-3 in penalty kicks after a 1-1 tie in regular time and overtime (yes, I just looked up the scores). Instead, they had a four-minute report on Team USA, soon to be eliminated.  And you can bet that the omission of the two games’ scores was calculated. After all, they had to do an important segment on the manufacture of cast iron skillets.

 

A new species of mammal (a sengi)

June 29, 2014 • 12:07 pm

New species of mammals aren’t found very often, but reader Roo called my attention to one in the Torygraph’s “Pictures of the day” showing a new species of what’s called a “shrew”. But it isn’t really a shrew, it’s a sengi, and can you believe this (from the California Academy’s press release)? (My emphasis):

Sengis are restricted to Africa and, despite their small size, are more closely related to elephants, sea cows, and aardvarks than they are to true shrews. Found in a remote area of Namibia, on the inland edge of the Namib Desert at the base of the Etendeka Plateau, scientists believe this new species went undescribed for so long because of the challenges of doing scientific research in such an isolated area. Yet it is precisely this isolation, and the unique environmental conditions in the region, that have given rise to this and other endemic organisms.

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A new mammal has been discovered in the remote desert of western African. The elephant shrew (Macroscelides micus) has a long-nose and looks like a mouse but is more closely related genetically to elephants scientists from the California Academy of Sciences who helped identify the tiny creature said. Picture: REUTERS/California Academy of Sciences

From the Cal Academy’s webpage on sengis:

Few mammals have had a more colorful history of misunderstood ancestry than the elephant-shrews, or sengis. Most species were first described by Western scientists in the mid to late 19th century, when they were considered closely related to true shrews, hedgehogs, and moles in the order Insectivora. Since then, there has been an increasing realization that they are not closely related to any other group of living mammals, resulting in biologists mistakenly associating them with ungulates, primates, and rabbits. The recent use of molecular techniques to study evolutionary relationships, in addition to the more traditional morphological methods, has confirmed that elephant-shrews represent an ancient monophyletic African radiation. Most biologists currently include the elephant-shrews in a new supercohort, the Afrotheria, which encompasses several other distinctive African groups or clades. These include elephants, sea cows, and hyraxes (the Paenungulata); the aardvark and elephant-shrews, and the golden-moles and tenrecs

This species, in the genus  Macroscelides, is described in a new paper in the Journal of Mammalogy (reference below), whose first author is Jack Dumbacher. Jack is one of our U of C grad-student alumni who in his Ph.D. thesis described the world’s first aposematic (and toxic) bird, the hooded pitohui.

The sengi’s arid habitat (photo from the paper):

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The species was identified originally by morphological traits, but the journal also shows that it’s quite distinct by molecular analysis of two mitochondrial and two nuclear genes:

While collecting and examining sengi specimens from southwestern Africa, Drs. Jack Dumbacher and Galen Rathbun encountered an unusual specimen collected in the remote northwestern region of Namibia that differed in appearance from any of the museum specimens that they had examined previously. The specimen was significantly smaller, had rust-colored fur, a large, hairless gland on the underside of its tail, and lacked dark skin pigment. Preliminary genetic analysis also showed important differences between this specimen and close relatives.

Suspecting they may have encountered a new species, the team—including research colleagues in Namibia, Timothy Osborne (California Academy of Sciences), Michael Griffin (Republic of Namibia Ministry of Environment and Tourism), and Seth Eiseb (National Museum of Namibia), all co-authors on the paper—set out on nine expeditions between 2005-2011. In total, the team collected 16 specimens for comparative analyses.

Nine expeditions to find this thing! That’s a lot of dough; I hope it’s sufficiently interesting. There are 19 previously described species of sengis, and you can find a gallery of all of them here.

How many new species of mammal are discovered in the wild each year? Put your guess below, and no cheating!

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Dumbacher, J. et al. 2014. A new species of round-eared sengi (genus Macroscelides) from Namibia. J. Mammalogy 95(3):443–454,

Elsevier and other academic publishers still gouging libraries

June 29, 2014 • 8:43 am

An article by Ian Sample in the June 17 Guardian summarizes a paper by Theodore Bergstrom et al.published in the Proceedings of the National Academies of Science (reference and abstract below) about how academic publishers price their electronic journals when selling access to libraries (and hence members of a subscribing university).

Although many for-profit academic publishers keep the prices of their library contracts secret (they do this so they can charge different prices to different universities), state universities are required by law to divulge this information under the Freedom of Information Act. Using that , Bergstrom et al. wrote to 55 university libraries and 12 library consortia (e.g., the University of California system) to find out how much they paid for their journals (often sold as “bundles: groups of journals published by a single academic publisher).  They got information for 360 contracts. The the results are disturbing, especially with regard to private publishers like Elsevier versus nonprofit publishers like Oxford University Press. They also divided universities into three classes:

  • Class 1: “Research extensive” universities that are highly devoted to research and award many Ph.D.s
  • Class 2: “Research intensive” universities that award Ph.D. but are not devoted as much to research
  • Class 3: “Master’s” institutions that award at least 50 master’s degrees but fewer than 20 Ph.D.s per year

They also got prices for six for-profit publishers of academic journals: For-profit publishers:

Elsevier

Springer

Wiley

Emerald

Sage

Taylor & Francis

The nonprofit publishers included Oxford University Press, Cambridge University Press, the American Chemical society, and a whole group of publishers (U.S. National Academy of Sciences, etc.) listed in the second table below. To make things equitable, the authors did legwork calculating how many times each firm’s journals were cited, so that the price of an electronic bundle for a library sold by a publisher like Springer or OUP can be expressed as “dollars charged per times articles in their journal was cited”. This gives an idea of how much “bang for the buck” university libraries pay when they buy a contract. In other words, that’s how much they pay for the scientific value of the journals, as measured by the impact those journals make on the field. First, here are Bergstrom et al.’s mean prices (most of these are negotiated for profit-making journals) for “bundles” of the press’s journals. Bundle sizes vary from just a few of the publisher’s journals to the entire catalogue. This is the mean price across all bundles bought, not weighted by citation:

Screen shot 2014-06-29 at 6.52.57 AMYou can see two things from the above: contracts, especially for for-profits, are extraordinarily expensive. You pay over a million bucks for a year’s access to an average Elsevier bundle if you’re a top-flight research university. Prices are much less for less research-intensive schools, but still appreciable. Remember that university libraries have to buy many of these bundles, so you see why tuition costs are rising (journal bundle prices go up 5-10% per year for the profitmaking firms). You can also see that, with the exception of Emerald (whose bundles may be small; I don’t know), the nonprofit publishers charge much less: $62,743 max for the American Chemical Society bundles for a top-flight university. Now let’s look at the important figure for a bundle-buying university: the per citation cost. First I’ll give Bergstrom’s table for NONPROFIT publishers.

These are divided into three types of bundles: those for which the individual library negotiates a bundle price (“negotiated pricing”), those publishers that simply price journals by the size and nature of a university (“tiered pricing”: set prices, no negotiation), and those journals that charge every university the same for a bundle of journals (“uniform pricing”). Again, this is the “scientific bang per buck” cost of buying a bundle. For the nonprofits, the library pays usually less than a dollar for each article cited in a bundle (Cambridge University Press is an exception, though my own university’s press and the American Psychological Association are higher. Overall, there’s not much of a price differential among the three types of universities.

Screen shot 2014-06-29 at 6.53.15 AMHere are the figures for for-profit publishers. Look at the difference!

Screen shot 2014-06-29 at 6.54.01 AMThe mean prices are higher except for master’s universities:  I calculate $5.93 for the research-extensive universities, $2.10 for the research intensive universities, and only $ 0.94 for the master’s universities. The most research-oriented universities pay over three times the money per citation from for-profit publishers than from nonprofit publishers. And of course those are the universities that buy most of the bundles, because they require access.

The prices for research-extensive universities are ludicrous, for production costs are nowhere near that different for profits and nonprofits (I expect publishers’ representatives to issue statements explaining why they must charge so much!) It’s pure profit. And we know this because the article also reports the profits for Elsevier, Springer, and Wiley which were, respectively, 36%, 33.9%, and 42% of total sales revenue. (Nonprofits, of course, make 0% profit.) That is a huge profit for any type of organization. Publishers like Elsevier and Springer and Taylor & Francis are simply gouging their library customers, and that’s why they keep bundle prices secret. As the article reveals (judicious inquiry will yield you a copy), universities can bargain for bundles, but since the universities contracts with many for-profit publishers specify that all prices are secret (imagine if you couldn’t tell your neighbor what you paid for a car!), nobody knows how to bargain. It’s a monopoly! Ian Sample sums up this gouging in the Guardian:

Writing in the journal Proceedings of the National Academy of Sciences, the economists reveal that some universities have saved fortunes by bargaining hard with commercial publishers. The University of California fought for a deal that meant their subscriptions to Elsevier journals rose only 1.5% per year from 2003 to 2013. Had they accepted Elsevier’s requests for an annual increase of 5%, their annual subscription would have been nearly $13m, instead of the $9.3m they agreed to pay in 2013.

Some institutions have been quite successful in bargaining for lower prices, whereas others may not have been aware that better bargains can be reached. Perhaps this variation explains publishers’ desires to keep contract terms confidential,” they write. In 2011, the journal publishing divisions of Elsevier, Springer, and Wiley reported profits of 36%, 33.9% and 42% respectively of their sales revenues.

Timothy Gowers, a mathematician at the University of Cambridge, who has called for researchers to boycott Elsevier, said: “One of the main reasons that universities have for many years accepted price increases for academic journals that are way above inflation is that their contracts have been subject to confidentiality clauses. The data made public by Bergstrom et al are therefore extraordinarily welcome. They demonstrate in detail the way that the major commercial publishers have been exploiting their monopoly position, information that I hope will lead to many more libraries cancelling their Big Deal contracts.”

I have previously asked my fellow academics to consider boycotting Elsevier, a notorious gouger. There is a petition to do so, and it’s been signed by 14,680 researchers.  You can sign the “The cost of knowledge” petition, signed by 14,680 researchers as of yesterday, by filling in the form shown in the screenshot below (just click on the shot, or the links above to go to the page). Those researchers include me, Jonathan and Michael Eisen, and physicist Sean Carroll (I haven’t done an extensive search).  And since I signed it over a year ago, I have neither published, refereed, or done any editorial work for Elsevier journals. If you’re a researcher, consider adding your name to it, or passing around the link. It’s time for publishers to stop gouging researchers (and their government grants, funded by the taxpayers) to make obscene profits! Even if you’re not a scientist, you’re paying money into the pockets of these greedy for-profit publishers. It’s obscene.

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Reference: Bergstrom, T. C., P. N. Courant, R. P. McAfee, and M. A. Williams. 2014. Evaluating big deal journal bundles. Proc. Nat. Acad. Sci. USA, early edition, ww.pnas.org/cgi/doi/10.1073/pnas.1403006111