My duck is back again

August 29, 2017 • 9:45 am

After more than a 24-hour absence, Honey the Duck reappeared this morning, and my heart leapt as I saw her paddling toward me. She had a respectable breakfast and then retired into the reeds. Her wing feathers are very long now, and I suspect she’ll leave for good when I’m in Poland.

Yes, this cycle of departure and return is an emotional roller coaster, for I do love that damn duck! Who knew I could bond with a mallard?

Here she is this morning; note the distinctive bill stippling that I can use to identify her if she returns. Her speculum glowed a deep purple in the early light:

Here are the bill markings on her left side: 

 

More on biology and race

August 29, 2017 • 9:15 am

by Greg Mayer

Jerry posted yesterday on an article at Quillette by Bo Winegard, Ben Winegard and Brian Boutwell on biology and race, commending it for its sensibleness. I thought I’d chime in with my own thoughts. Jerry’s a population geneticist and I’m a herpetologist, but our views turn out to be quite similar.

So, here, in a nutshell, is what biology has to say about race. To begin with, race is not a technical term in biology—it is used loosely for any differentiated subdivision of a species. For example, there is a fruit fly in Wisconsin that feeds on hawthorn and apple, and the flies that feed on the different trees are somewhat different, and so people refer to the “hawthorn race” and the “apple race”. Often, as in fact is true in this case, the term “race” is used because people aren’t quite sure exactly how different the forms are from one another.

In zoology, the term “geographic race” does have a well-defined meaning. It means that if you look at an individual of a species, you can tell where it is from, or conversely, that if you tell me where the individual is from, I can tell you what it looks like. For example, there’s a species of lizard in Jamaica that if you brought one back and showed it to me, I could tell you whether it’s from the vicinity of Kingston, or Montego Bay, or Negril, etc. Lizards from these various places are members of the same species because they interbreed with one another where they are in geographic proximity; they are geographic races because I can tell where they are from by looking at them. Geographic races, if they are given taxonomic names, are called subspecies.

With regard to humans, most of the genetic variability is within populations, not between local populations or races. This was pointed out by Dick Lewontin in 1972 (Dick, of course, was Jerry’s dissertation adviser, and my de jure adviser). However, just because most of the variation is within populations doesn’t mean you can’t tell where someone is from by looking at him. The geneticist A.W.F. Tony Edwards later called the mistaken notion that a majority of variation being within populations precludes identification of population membership “Lewontin’s Fallacy”. [I’ve no idea where I got the idea he was called “Tony”. I’ve never met him, and people who do know him have assured me he’s called “Anthony”.]

As a former student of Lewontin’s, I’m not especially fond of Edwards’ choice of term, but nonetheless Edwards is entirely correct. It is of crucial importance to note that the scientific questions asked by Lewontin and Edwards were different. Lewontin asked “What proportion of genetic variation (in the analysis of variance sense) in humans is within and among populations?” The answer is that roughly 85% is within populations, the rest among local populations and races. That is the answer Lewontin gave in 1972, and it is entirely correct, confirmed by much more molecular data since that time. Edwards asked “Can individual humans be assigned to races from genetic data?”, or, alternatively, “Can human races be diagnosed (in the taxonomic sense of subspecies)?” The answer is yes, they can. Edwards shows that his answer to his question is entirely compatible with Lewontin’s answer to Lewontin’s question. A paper by Rosenberg et al. (2002) clearly illustrates for a large data set the truth of both Lewontin and Edwards’ answers to their respective questions. Lewontin goes on from his finding (with which Edwards entirely agrees), to argue further that this level of difference between races is not worthy of taxonomic recognition. Edwards doesn’t actually express an opinion about whether human races should be recognized taxonomically, but does show that the 85/15 division of within/among population variation is no bar to doing so.

One thing a bit off in the Quillette piece is their claim that Lewontin’s conclusion “was based on a peculiar way of measuring genetic variation.” It was not; it was based on a perfectly natural and obvious way of measuring genetic variation, and, indeed, Dick was right, as Edwards acknowledged. The distinction between single and multi-locus genotypes mentioned by Winegard et al. does not at all nullify Lewontin’s conclusion as to the apportionment of variation. What Edwards showed very clearly is that multi-locus genotypes allow individuals to be reliably assigned to populations, even when most of the variation is within populations. In understanding patterns of genetic variation in humans, it is very important to see that Lewontin and Edwards asked different questions, and that they are both right in their answers to their respective questions.

Lewontin and Edwards agree on the moral equality of human beings; Edwards just doesn’t want that moral equality to depend on any contingent facts of genetic similarity. Lewontin wouldn’t want it to, either, but sees the high genetic similarity among human races (genetic similarity is much lower among races in some other species) as empirical reinforcement for his moral conclusion. The problem with basing human moral and civil equality on empirical claims about human biological similarity is that such claims may prove to be mistaken. Because it does not depend on some empirical finding which new data may put into question, I think Edwards has the more robust basis for his moral conclusion.

As Edwards sums up:

“But it is a dangerous mistake to premise the moral equality of human beings on biological similarity because dissimilarity, once revealed, then becomes an argument for moral inequality.”


Edwards, A.W.F. 2003. Human genetic diversity: Lewontin’s fallacy. BioEssays 25:798–801. pdf

Lewontin, R.C. 1972. The apportionment of human diversity. Evolutionary Biology 6:381-398. pdf

Rosenberg, N.A., J.K. Pritchard, J.L. Weber, H.M. Cann, K.K. Kidd, L.A. Zhivotovsky, and M.W. Feldman. 2002. Genetic structure of human populations. Science 298:2381-2385. pdf

Spot the salamander!

August 29, 2017 • 8:15 am

Matthew Cobb found this “spot the salamander” tweet (it’s a hellbenderCryptobranchus alleganiensis), and I had a hard time with it. Can you spot it? I’ll put the answer below the fold (click on “read more”):

Click below to see the amphibian:

Continue reading “Spot the salamander!”

Readers’ wildlife photographs

August 29, 2017 • 7:30 am

Today we begin with some photos by Stephan Barnard, who’s been absent from this page for a while. His notes are indented:

The first is of a Rufous Hummingbird (Selasphorus rufus), not unlike some others I’ve sent.

The second is a Solitary Sandpiper (Tringa solitaria), a photo that would otherwise be unremarkable except that it’s the first one I’ve seen. They look very similar to Lesser Yellowlegs (Tringa flavipes), which I see here, but there was something different about it that caught my eye. It seemed out of place.

“Of the world’s 85 sandpiper species, only the Solitary Sandpiper and the Green Sandpiper of Eurasia routinely lay eggs in tree nests instead of on the ground.” —allaboutbirds

Yet another Rufous Hummingbird (Selasphorus rufus) in flight.

And a turtle from Andrew Lowry:

This is a Sonoran Desert Tortoise (Gopherus morafkai) that I moved out of a road near Wickenburg, Arizona. The photo with the boot is to show scale; that’s a (men’s) size 9. The road is frequently traveled by trucks hauling rock, so I had to take action. There’s a trick to moving a tortoise– if they’re startled, they’ll empty their bladder, which can lead to death via dehydration. They have to be lifted slowly and gently and not too high off the ground. The dry state of the boot shows that I was successful. 😉


JAC: Spiffy ostrich cowboy boot!

And from Tim Anderson in Australia, some astronomy apparatus:

This picture is not wildlife, though the observatory may help one day in locating life on some distant exoplanet. This is the CSIRO radio telescope outside of Parkes, NSW. It is one of the glories of Australian science. The black strip on the dish’s surface is a leftover from the movie “The Dish”, which celebrates (with some historical liberties) the observatory’s role in transmitting video imagery of Neil Armstrong’s first walk on the Moon in 1969. It is a lovely movie and I recommend it (the black strip involved a game of cricket). On a personal note, I worked very briefly at the observatory in the mid-1980s.

Tuesday: Hili dialogue

August 29, 2017 • 6:30 am

Good morning on Tuesday, August 29, 2017. In two days September will have come again, have come again, and in Virginia the chinkapins will be falling, and all living things on the Earth will turn home again. It’s also National Chop Suey Day, a vile goopy concoction that, if you’re going to decry cultural appropriation from the Chinese, is the dish to point at. It’s also International Day against Nuclear Tests, something the North Koreans are flouting, as well as sending missiles over Japan. I tell you, this will come to no good end.

On this day in 1756, Frederick the Great attacked Saxony, beginning the Seven Years’ War that embroiled much of Europe, and even had a spinoff in India. On August 29, 1825, Portugal granted independence to Brazil, and exactly six years later Michael Faraday discovered electromagnetic induction: the production of electricity by magnetism—and the first suggestion that they may be just one “force”.  On this day in 1911, Ishi, a member of the Yahi tribe, and considered to be the last Native American to make contact with Europeans, walked out of the wilderness near Oroville California, looking for meat. He was promptly clapped into an apartment at the University of California in San Francisco, where, after anthropologists had studied him,  he died five years later of tuberculosis (he had no resistance to “European” diseases).  I read an eponymous book about him in a college anthropology course, but I’m not sure if the story still stands up. Here he is on the right:

Yahi translator Sam Batwai, Alfred L. Kroeber, and Ishi, photographed at Parnassus in1911. Image courtesy of UC Berkeley, Phoebe Hearst Museum of Anthropology.

On this day in 1949, the Soviet Union tested its first atomic bomb in Kazakhstan.  On August 29, 1966, the Beatles gave their last concert before paying fans at Candlestick Park in San Francisco. (That doesn’t count their free rooftop concert.)  Finally, some déjà vu: on this day twelve years ago, Hurricane Katrina wrought havoc among much of the Gulf Coast, producing a death toll of over 1800 people and causing over $108 billion in damage.

Notables born on this day include John Locke (1632), Jean-Auguste-Dominique Ingres (1780), Ingrid Bergman (1915), Charlie Parker (1920), Richard Attenborough (1923), John McCain (1936), Eddie Murray (1956), Michael Jackson (1958) and Neil Gorsuch (1967, too young!). Those who died on this day include Brigham Young (1877), Sayyid Qutb (1966),Éamon de Valera (1975), Ingrid Bergman (1982, died on her 67th birthday), Lee Marvin (1987), Honeyboy Edwards (2011, I once met him and hired him to play blues for a charity event), and Gene Wilder (2016).

In honor of Bird’s birthday, here’s a rare live video of him playing in 1950 with another favorite jazz saxophonist, the great Coleman Hawkins. And read the column about Parker in today’s New York Times.

Meanwhile in Dobrzyn, Hili is sleeping sweetly, but her dreams are dark: 

Hili: I have a dream.
A: What dream is it?
Hili: That some links in the food chain would run slower.
In Polish:
Hili: Mam marzenie.
Ja: Jakie?
Hili: Żeby niektóre ogniwa łańcucha pokarmowego wolniej biegały
 From Grania, a tweet showing one angry amanuensis. Note the pointing fingers and drawing of urinating cat (as always, a horrible likeness of a cat):

Here’s an owner who truly loves her cat, sacrificing her pancakes for the moggie:

https://twitter.com/marienassar_/status/901706558618439680

The bill is gone

August 28, 2017 • 3:00 pm

. . . maybe. My mallard Honey was acting weird yesterday, being very skittish and not eating all her food before paddling back to her duck island. Today she hasn’t been around for breakfast, lunch, or tea. Maybe she’s just messing with me, but maybe she’s gone for good. If she is, well, that means she can fly, and I’m happy about that. But I’ll miss her.

Here she is with her ducklings (3 drakes and a hen) on May 28 and then on June 31. They all grew up healthy and flew away. She was a great mother.

They grow fast, don’t they? Honey’s in the rear.

Maybe she’ll come back tomorrow.