This is the last video in the series produced by PBS and “It’s Okay to Be Smart”. And this one seems fine to me, dispelling the myths of evolution as a progressive process and of humans as the pinnacle of evolution. As for the notion that we should feel good about all that, well, tell that to the theists!
Is the Discovery Institute falling apart?
Since the DI reads this site, they’ll undoubtedly not only reassure us that they’re fine, but go after me in the process. Too bad: they’re a bunch of creationist mushbrains, and they know they’ve lost the war. What prompts me to ask the question above is their Big Announcement yesterday that Attack Gerbil Casey Luskin is leaving the DI to, as he says, “fulfill a lifelong goal of furthering my studies.” This follows hard on the heels of William Dembski announcing last month on his blog that he’s leaving the study of ID for, as he says, “education, specifically to advancing freedom through education via technology.” The DI, though, still lists him as a Senior Fellow.
The humorous thing about Luskin’s long farewell, though, is his account of the Great Victories achieved by the DI during his tenure. Here are two:
During my time at Discovery Institute, we have also seen some of ID’s longstanding scientific predictions spectacularly fulfilled. Exhibit A: The ENCODE project’s discovery of widespread function for non-coding DNA. Again, since the late 1990s I’d been hearing ID-critics say “junk DNA refutes ID.” At that time, my rejoinder was “We haven’t even studied this ‘dark matter of the genome’ enough to know what it does. Let’s just wait and see.” Well, we’ve been waiting and now we’ve seen: ID was correct all along. Early indications of this mass-functionality first came to light in 2007 when ENCODE published its preliminary results suggesting that a great portion of our DNA is transcribed into RNA. But in 2012 ENCODE published its main results, showing that over 80 percent of the genome gives strong evidence of function. Papers uncovering specific functions for specific “junk” genetic elements continue to pour forth.
This is intellectually mendacious, for, as everyone knows now, the early claim that ENCODE showed that 80% of our genome had a function was incorrect, and there remains a huge portion of the human genome that’s nonfunctional. Even the leaders of the ENCODE projct now admit that they overestimated the functionality of the genome. (For a good discussion of the issue, see Larry Moran’s posts at Sandwalk, especially this one.) And even if 80% of the human genome were functional, how does that prove the existence of an intelligent designer? What about the other 20%? Did the Great Designer screw up there? But given the apparently erroneous data produced by the ENCODE researchers, will the IDers who touted the original ENCODE findings now admit that their “prediction” was wrong? Don’t count on it.
Exhibit B: The burgeoning field of epigenetics has also validated ID’s prediction of new layers of information, code, and complex regulatory mechanisms in life. We’ve seen discoveries of new DNA codes (e.g., multiple meanings for synonymous codons), as well as the histone code, the RNA splicing code, the sugar code, and others. It’s a great time to be an ID proponent!
Umm. . . the “new layer of information” that ID predicted was DIVINE information, not epigenetics. And the part of epigenetics that does add “information”—the epigenetic modifications of DNA already encoded in the genome—have been known for a long time. As for those “Lamarckian” modifications induced by the environment, well, that “information” is erased after a couple of generations, and so has no evolutionary import.
As always, it’s a lousy time to be an ID proponent, for, like Rodney Dangerfield, you get no respect—except from other creationists.
Let’s review the goals of the DI’s “Wedge Document,” set out in 1999:
Five year goals:
To see intelligent design theory as an accepted alternative in the sciences and scientific research being done from the perspective of design theory.
To see the beginning of the influence of design theory in spheres other than natural science.
To see major new debates in education, life issues, legal and personal responsibility pushed to the front of the national agenda.
Nope; not yet.
Twenty year goals:
To see intelligent design theory as the dominant perspective in science.
To see design theory application in specific fields, including molecular biology,biochemistry, paleontology, physics and cosmology in the natural sciences, psychology, ethics, politics, theology and philosophy in the humanities; to see its influence in the fine arts.
To see design theory permeate our religious, cultural, moral and political life.
Well, we’re sixteen years in already, and I don’t think this is gonna happen in the next four years.
h/t: Doc Bill
Russell Blackford on science, religion, accommodationism, and Faith Versus Fact
Over at the “Cogito” (philosophy) section of The Conversation website, Brother Russell Blackford discusses (and dismisses) the compatibility of science and religion in a short essay called “Against accomodationism: How science undermines religion.” A substantial part of his piece is also a review of Faith Versus Fact, which I’m happy to see is positive.
I won’t summarize Russell’s article, which you should read in full on The Conversation site, but I wanted to highlight a few issues that Russell, as a philosopher, has clarified for me. And I’ll include at the end a bit of self promotion.
Blackford’s thrust is a philosophical analysis of the incompatibility between science and religion, and part of that is an attack on the most common way people try to comport the areas: Steve Gould’s NOMA gambit. In short, Gould claimed that “proper” religion didn’t make any empirical claims about the cosmos (that’s the ambit of science) but rather encompassed the area of meanings morals, and values. Thus science and religion were “non-overlapping magisteria” (NOMA). To effect this concordat, Gould had to claim, for instance, that creationism wasn’t part of religion. You have to squint pretty hard to see that as true!
Gould’s argument failed on two grounds. First, most religions, and all the Abrahamic ones, make claims about reality: the existence of gods that have a certain nature, how life came to be, the existence of souls and afterlives, Heaven and Hell, the moral codes dictated by deities, and so on. Some of these are empirically testable, some are not, but all are claims about reality. Gould’s denial that such claims are valid parts of religion is the reason most theologians have rejected the NOMA solution (see pp. 106-112 in Faith Versus Fact for statements to this effect). As Russell notes in an earlier essay (see link below):
Unfortunately for Gould’s enterprise, religions are not secular ethical philosophies dressed up with symbols. They are encyclopedic explanatory systems that make sense of the world of human experience in terms of a supernatural realm and its workings. They end up making statements about humanity’s place in the space-time Universe that are open to conflict with scientific statements about physical nature. With the example of Genesis and its genealogies, reinterpretations are possible, and not just of the first three chapters, but it seems wrong-headed to rule out the religious legitimacy of accepting the book’s literal words.
Second, it’s palpably clear that religion is not the sole source, or even a good source, for meaning, morals, and values. Those who make such a claim neglect the long tradition of secular ethics—extending from the ancient Greek philosophers, through Kant, Spinoza, Hume, and Mill, down to people like Peter Singer and Anthony Grayling in our own day.
Blackford published a longer critique of NOMA that I highly recommend. The link to that critique on his own website embedded in his present essay doesn’t work for me, but you can find it at the following link: “Stephen Jay Gould on Science and Religion.” If you want a definitive philosophical refutation of the most common brand of accommodationism, that’s it.
In showing how the advances of science have forced religion to constantly rejigger its dogmas, Russell brings up a point that I’ve unduly neglected: those god-killing advances have come from the humanities as well.
I need to be add that the damage to religion’s authority has come not only from the sciences, narrowly construed, such as evolutionary biology. It has also come from work in what we usually regard as the humanities. Christianity and other theistic religions have especially been challenged by the efforts of historians, archaeologists, and academic biblical scholars.
Those efforts have cast doubt on the provenance and reliability of the holy books. They have implied that many key events in religious accounts of history never took place, and they’ve left much traditional theology in ruins. In the upshot, the sciences have undermined religion in recent centuries – but so have the humanities.
In my own book I didn’t concentrate as much on the historical damage of science to religion’s authority as on their present incompatibilities. Nevertheless, I see “science” not as a body of facts, but a way of understanding reality that combines reason, empirical observation, testability, doubt, and so on. Using that definition, enterprises like Biblical scholarship (e.g., did the Exodus occur?), plumbing, car mechanics, and linguistics can, if approached using science’s toolkit, be seen as “science broadly construed.” My point was not really to redefine science, but to show that the way people accept important truths in their everyday lives differs profoundly from the way believers and theologians approach religious “truth.”
Russell has a minor quibble with my expansive conception of science, but I can live with that. The important point is that there’s really only one way of knowing, and that’s the way that’s either based on or mimics science. Religion, in contrast, is not a way of knowing. Russell continues from the above:
Coyne would not tend to express it that way, since he favours a concept of “science broadly construed”. He elaborates this as: “the same combination of doubt, reason, and empirical testing used by professional scientists.” On his approach, history (at least in its less speculative modes) and archaeology are among the branches of “science” that have refuted many traditional religious claims with empirical content.
. . . It follows that I don’t terribly mind Coyne’s expansive understanding of science. If the English language eventually evolves in the direction of employing his construal, nothing serious is lost. In that case, we might need some new terminology – “the cultural sciences” anyone? – but that seems fairly innocuous. We already talk about “the social sciences” and “political science”.
For now, I prefer to avoid confusion by saying that the sciences and humanities are continuous with each other, forming a unity of knowledge. With that terminological point under our belts, we can then state that both the sciences and the humanities have undermined religion during the modern era. I expect they’ll go on doing so.
That’s fine with me, so long as the “unity of knowledge” emphasizes the similarity of methods used by science and the humanities to gain true knowledge. For a lot of the humanities (e.g., the many schools of lit-crit) aren’t engaged in finding reliable knowledge.
When discussing FvF, Russell makes a further point that I’ve neglected:
Coyne emphasizes, I think correctly, that the all-too-common refusal by religious thinkers to accept anything as undercutting their claims has a downside for believability. To a neutral outsider, or even to an insider who is susceptible to theological doubts, persistent tactics to avoid falsification will appear suspiciously ad hoc.
To an outsider, or to anyone with doubts, those tactics will suggest that religious thinkers are not engaged in an honest search for truth. Rather, they are preserving their favoured belief systems through dogmatism and contrivance.
That—especially the last sentence—seems incontrovertible to me, especially in light of those believers like Karl Giberson who aver that no observation could ever refute their beliefs. No scientist would ever say such a thing about the provisional truths we accept. Religion isn’t a search for truth, but a search for confirmation of what you were taught, what you want to believe, or what you find emotionally fulfilling.
Finally, the self-aggrandizement: Russell’s assessment of the book. I’m chuffed here for two reasons. First, he’s not a man who would agree with my arguments simply because we’re friends. Anyone who knows Russell realizes that while he’s even-tempered and kind, he won’t praise something unless he really means it. Nor will he withhold deserved criticism.
Second, he emphasizes that FvF is not a strident or shrill book. Even though it’s been characterized that way by critics like John Horgan, that’s just wrong. The faithful or the petulant may disagree with my arguments, but I don’t think they can support a claim that my tone or arguments are hostile or thoughtless.
In his take on my book at Scientific American, Horgan said this after his criticisms:
In spite of these objections to religion [the problem of evil, the disparity between different faiths, etc.], I’m not an atheist. In fact, I think that science and religion converge in one important way. The more scientists investigate our origins, the more improbable our existence seems. If you define a miracle as an infinitely improbable event, then you could call our existence a miracle. Even Steven Weinberg, a physicist and adamant atheist, once conceded that “sometimes nature seems more beautiful than strictly necessary.” My sense of life’s miraculousness keeps me from ruling out the possibility of supernatural creation.
But then what kind of supernatural creation could still be in play? Surely Horgan, a science journalist, doesn’t agree with the Genesis account. Is he then sympathetic to intelligent design? I doubt it, for that would destroy his credibility as a science writer. Perhaps he sees the physical laws of the universe as having been fine-tuned by a supernatural force or being, for he considers our existence as being “infinitely improbable.” Well, that’s his take, and others like Sean Carroll disagree (see yesterday’s post). That’s all I’ll say about Horgan, and I’ll end with Blackford’s overall evaluation of FvF:
A valuable contribution
In challenging the undeserved hegemony of religion/science accommodationism, Coyne has written a book that is notably erudite without being dauntingly technical. The style is clear, and the arguments should be understandable and persuasive to a general audience. The tone is rather moderate and thoughtful, though opponents will inevitably cast it as far more polemical and “strident” than it really is. This seems to be the fate of any popular book, no matter how mild-mannered, that is critical of religion.
Coyne displays a light touch, even while drawing on his deep involvement in scientific practice (not to mention a rather deep immersion in the history and detail of Christian theology). He writes, in fact, with such seeming simplicity that it can sometimes be a jolt to recognize that he’s making subtle philosophical, theological, and scientific points.
In that sense, Faith versus Fact testifies to a worthwhile literary ideal. If an author works at it hard enough, even difficult concepts and arguments can usually be made digestible. It won’t work out in every case, but this is one where it does. That’s all the more reason why Faith versus Fact merits a wide readership. It’s a valuable, accessible contribution to a vital debate.
Woody Guthrie’s New Years Rulin’s
by Matthew Cobb
You may have seen this – it’s been going the rounds for a few years now, but it hasn’t been posted here before. Here are Woody’s new year resolutions for 1943. [JAC: he was 30.]
They all seem pretty good to me, notably #3. Click to enlarge.
JAC: I’ve added a transcript for the myopic. And if you don’t know who Woody Guthrie is, Ceiling Cat help you!
NEW YEAR’S RULIN’S
1. WORK MORE AND BETTER
2. WORK BY A SCHEDULE
3. WASH TEETH IF ANY
4. SHAVE
5. TAKE BATH
6. EAT GOOD – FRUIT – VEGETABLES – MILK
7. DRINK VERY SCANT IF ANY
8. WRITE A SONG A DAY
9. WEAR CLEAN CLOTHES – LOOK GOOD
10. SHINE SHOES
11. CHANGE SOCKS
12. CHANGE BED CLOTHES OFTEN
13. READ LOTS GOOD BOOKS
14. LISTEN TO RADIO A LOT
15. LEARN PEOPLE BETTER
16. KEEP RANCHO CLEAN
17. DON’T GET LONESOME
18. STAY GLAD
19. KEEP HOPING MACHINE RUNNING
20. DREAM GOOD
21. BANK ALL EXTRA MONEY
22. SAVE DOUGH
23. HAVE COMPANY BUT DON’T WASTE TIME
24. SEND MARY AND KIDS MONEY
25. PLAY AND SING GOOD
26. DANCE BETTER
27. HELP WIN WAR – BEAT FASCISM
28. LOVE MAMA
29. LOVE PAPA
30. LOVE PETE
31. LOVE EVERYBODY
32. MAKE UP YOUR MIND
33. WAKE UP AND FIGHT
Readers’ wildlife photographs
First we have several photographs of a lovely hummingbird taken by reader Joshua Lincoln:
This is the Fiery-throated Hummingbird (Panterpe insigns). It is from Cerro de la Muerte in Costa Rica. Cerro de la Muerte means Mountain of Death. It is the highest point of the Inter-American Highway in Costa and for anyone who has driven a rental car very much there, the description is fairly accurate. [JAC: When I was taking an Organization for Tropical Studies ecology course in the summer of 1973, we visited this site, which became appropriately named in another way: about half the class contracted a bad stomach bug at Cerro de la Muerte, and many of us became incapacitated, lying like lox in the dormitory.]
The structural coloration (as opposed to pigment) of the hummingbird’s feathers becomes apparent when you see how light waves either add (strong reflection) or subtract (weak reflection) as they reflect back from the feathers to our eyes (or the sensor in a camera). Here are a few photographs of the bird taken seconds apart demonstrating the effect.
Reader Marilee sent a round-leafed sundew:
Drosera rotundifolia photographed on Grand Manan Island in New Brunswick.“The whole upper surface [of the leaf] is covered with gland-bearing filaments, or tentacles ….The glands are each surrounded by large drops of extremely viscid secretion, which, glittering in the sun, have given rise to the plant’s poetical name of the sun-dew.” –from Darwin, Insectivorous Plants, in which he wrote about his experiments with this species, including movements of the tentacles, in great detail.
And another bird (and a plant quiz) from reader Barbara Wilson:
The good news is, I got some close-up photos of a Pine Siskin (Spinus pinus) near a bird feeder in western Oregon. Note yellow in wing. The bad news is that the reason a person can get this close is that the bird is sick, as so many Siskins we see are.
Question: What is the genus of grass, and how do you know?
Answer: Poa, bluegrass, and you can tell because the leaf tips (e.g. near the bird’s flanks) are shaped like the prow of a boat. (You can’t assume it’s a bluegrass because that’s what lawns are made of; in our area lawns are often filled with bentgrass, genus Agrostis.)
Perhaps some readers might know (I don’t) why so many siskins are ill.
Cats and d*gs on free will (i.e., the lack thereof)
Let’s start 2016 with two subjects dear to my heart: cats and free will. This cartoon, by Maria Scrivan, shows that in one respect cats are superior to many people in their understanding of the physical basis of mentation. I should add that seeing this written resolution might act on the cat’s brain to modify its future behavior:
Here’s a recently published Dilbert Classic, which not only gives the truth about “free will,” but shows the kind of fear mongering promoted by compatibilists who claim that without some notion of free will, we’re lost:

h/t: jsp, Janet D.
Friday: Hili dialogue (and Leon lagniappe)
It’s 2016! Or so I’m told. What will the year have in store for us? Come December, will we have experienced something completely unpredictable? (Some of us certainly will.) All of that, of course, has already been determined by the laws of physics. We secular Jews just hope we get through the year alive and unscathed. On this day in history, Paul Revere was born in 1735 and Betsy Ross, who purportedly sewed the first American flag at the behest of George Washington, was born in 1752. (That story is almost certainly wrong). A lot of laws, decrees, and so on took effect on this day in history, but that’s only because it’s the first day of the year, so we’ll ignore them. Instead, let’s go to Dobrzyn, where Ms. Hili is about to enter the orchard:
Hili: Freedom is an art.
A: What do you mean?
Hili: At the moment, squeezing through the bars
Hili: Wolność jest sztuką.
Ja: Co masz na myśli?
Hili: Chwilowo przeciskanie
And in Wroclawek, Leon has donned a collar and leopard-print bow tie to send us New Year’s greetings (see below the photo for linguistic twist):
Leon: To all my fans I wish a Feline Year!
Happy New Year from Google
SPOILER: From Google in the UK, here’s what you’ll see at the stroke of midnight. Congratulations—it’s a duck!
There’s an egg that’s been hatching for over a day at Google; what will emerge by tomorrow?












