A Sunday lunch in Chinatown

April 2, 2013 • 5:03 am

On Sunday I had the pleasure of taking a visiting speaker, professor John Willis of Duke University, to lunch.  John works on the adaptation of Mimulus (monkeyflowers) to unusual habitats—copper mines, serpentine soils, etc. More important, he’s a foodie and an old friend (he was a graduate student in our department in the Devonian), and asked to be taken out for Chinese food.  I took him to an old favorite, the Lao Hunan, a Hunanese restaurant that I’ve written about before (here and here).

The restaurant is unprepossessing, filled with Chinese people, and, although the waitstaff wear cheesy Mao uniforms (the Chairman was from Hunan), the food is authentic and superb (menu here). We ordered way too much food, but it was my job to introduce John to the restaurant’s diversity.

(Click photo to enlarge to full scrumptiousness.)

The first course was a cold appetizer, Tai Gan Hunan style (#103 on the menu).  A local food website recommended this, but I had no idea what it was. We asked the waitress, who had recently immigrated from China, what it was, and her answer was, “Vegetable!” When we asked what kind of vegetable, she said, “Green vegetable!” So I’m still mystified, but I’m sure some reader can identify this for me. It appears to be the stem of some type of plant, and was cooked with red chilis, sesame seeds, scallions, and a spicy sauce:

(UPDATE: this appears to be the stem of some type of lettuce that is dried, but the Google translation leaves a bit to be desired!)

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We had another spicy dish for a side course: “Famous Hunan chili in black bean sauce” (#605). It’s an incendiary concoction, but the best thing in the house. Stir-fried with garlic, fermented black beans (an underappreciated ingredient for Americans), this really brings out the vegetable nature of hot green chiles.  You can eat only a bit at a time, and even then you’ll pay for it the next day. But it’s well worth it.

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A must-order: “Chairman Mao’s favorite pork belly” (#411). From what I know it was indeed Mao’s favorite, as he loved the peasant foods of his province.  The fatty pork belly is cooked in a rich sauce with star anise and soy sauce, and was complemented with pepper and tomato.  Food police: do not complain about this dish! After all, Mao lived 83 years.

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Here’s #523: “Dry chili fish filet”.  A good dish, not too spicy and copious, with a light crunchy coating over absolutely fresh fish.

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Perhaps the second-best dish of the meal (after the chili and black beans): “Home fed chicken Xiang Xi style” (#302).  The chicken (cooked on the bone) was rich, tasting almost as if it had been smoked.

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Finally, a gratuitous vegetable dish, “Hunan style crispy eggplant”(#622), it was quite good, but given that we already ordered fried fish, I probably should have ordered Hunanese string beans, which aren’t breaded.

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Here’s John at the beginning of the meal. You can see that the restaurant isn’t fancy.  There were lots of leftovers, and John took half of them, swearing he’d eat them on the plane (what—with no rice or chopsticks?).

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And oy, were we full!

If you come to Chicago, like delicious and authentic Chinese food, be sure to eat here. You can thank me later.

Biologically-themed Google doodle

April 2, 2013 • 4:24 am

Today’s Google doodle, a particularly good one, celebrates the birthday,  life and work of Maria Sibylla Merian (2 April 1647 – 13 January 1717). (If you click on the doodle itself—not the one below—you’ll get a Google search for Merian.)

Screen shot 2013-04-02 at 5.17.37 AM

Merian, a German who later lived in the Netherlands, was a scientific illustrator who began her career drawing plants but then developed an interest in insects and their life histories. Her illustrations of the insects, not a hot topic of study in the 17th century, constituted a formidable advance in entomology. Here’s a brief bio from the National Museum of Women in the Arts:

In 1670, she and her husband moved to Nuremberg, where Merian published her first illustrated books. In preparation for a catalogue of European moths, butterflies, and other insects, Merian collected, raised, and observed living insects, rather than working from preserved specimens.

In 1685 Merian left Nuremberg and her husband, whom she was later divorced; she and her two daughters moved to the Dutch province of West Friesland. Eight years later, at the age of 52, Merian and her younger daughter embarked on a dangerous trip to the Dutch colony of Suriname, in South America, without a male companion. Merian had seen some of the dried specimens of animals and plants that were popular with European collectors, and she wanted to study them within their natural habitats. She spent the next two years studying and drawing the indigenous flora and fauna.

Forced home by malaria, Merian published her most significant book in 1705. The lavishly illustrated Insects of Surinam established her international reputation. The plates in NMWA’s collection come from a second, posthumously published edition, Dissertation in Insect Generations and Metamorphosis in Surinam.

A bit of her work:

Illustration of a Spectacled Caiman (Caiman crocodilus) and a False Coral Snake (Anilius scytale)

MSM

You can find all the cached Google doodles since 1998 here, and buy teeshirts of your favorite here.

h/t: Grania

A truly bizarre salamander

April 1, 2013 • 9:45 am

A new paper in Current Herpetology by Nishikawa et al.  describes a very bizarre salamander, just described and given the name of Tylotriton ziegleri. (It’s a “newt”, actually, which is simply an aquatic salamander in the family Salamandridae. Not all salamanders are newts. Newts in this group are known as “crocodile newts” for obvious reasons.)

Described from 18 males and 1 female collected in North Vietnam, T. ziegleri was recognized as a distinct species both on molecular (mitochondrial DNA) and morphological differences from other species in the group.  The intriguing thing about it is its appearance: totally bizarre, far more like a reptile than an amphibian.

Not only that, but it’s all black except for the tips of its toes and a thin stripe on the underside of its tail, which are orange:

Ziegler's crocodile newt (Tylototriton ziegleri). Photo courtesy of Tao Thien Nguyen.
Ziegler’s crocodile newt (Tylototriton ziegleri). Photo courtesy of Tao Thien Nguyen.

Damn, that’s a cool beast!

At first I thought the orange toes and tail stripe might be due to sexual selection by females. In that case only the males should show the trait, but no sexual dimorphism is mentioned in the paper. If the coloration is due to direct selection, then, it’s probably for other reasons. The salamander might, for instance, be “aposematic”: having warning coloration because it’s toxic.  The authors don’t speculate on this possibility, but many aposematic animals are black and orange (bees and wasps, for instance).

The male holotype (VNMN 3390) of Tylototriton ziegleri; dorsal (left) and ventral (right) views.Scale bar=20 mm.
The male holotype (VNMN 3390) of Tylototriton ziegleri; dorsal (left) and ventral (right) views.
Scale bar=20 mm.

Here’s a closeup of its head:

Detail of adult Ziegler's crocodile newt. Photo courtesy of Tao Thien Nguyen.
Detail of adult Ziegler’s crocodile newt. Photo courtesy of Tao Thien Nguyen.

There’s a news item about this species on Mongabay.com, which describes it as threatened:

Ziegler’s crocodile newt is currently only known from only a small habitat of montane forest and wetlands.

“Currently, habitat loss and degradation, especially around the breeding ponds, is a major threat to the populations of the new species,” the researchers write in the paper. “Legal protection of their habitats and regulation of excessive commercial collection are important measures for conservation of this species.”

Crocodile newts are popular in the illegal pet trade and are often over-collected from the wild. There are now ten known species, eight of which have been evaluated by the IUCN Red List. Of these eight, three are threatened with extinction, four are listed as Near Threatened, and only one is Least Concern.

h/t: Steve

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Nishikawa, K.,  M. Matsui, and T. T. Nguyen. 2013. A New Species of Tylototriton from Northern Vietnam (Amphibia: Urodela: Salamandridae). Current Herpetology 32(1): 34–49, February 2013.

Must we assume naturalism to do science?

April 1, 2013 • 6:45 am

Yonatan Fishman sent me a paper  (free online) that he’s just published with Maarten Boudry (they’re both philosophers, and we’ve discussed Boudry’s work before; see here and here).  The topic is of interest to both secularists and scientists: the claim that science can study only “natural” phenomena, and is powerless before supernatural ones.

If you’ve followed the science-vs.-creationism debates, you’ll know that they often involve disputes about the importance of “naturalism” in science. There are two brands of naturalism under discussion:

Methodological naturalism (MN): this is, as Fishman and Boudry (F&B) define it, “the view that science, by virtue of its methods, is limited to studying ‘natural’ phenomena and cannot consider or evaluate hypotheses that refer to supernatural entities.”

Ontological naturalism (ON; sometimes called “philosophical naturalism”): this is, as F&B note, “the metaphysical thesis that supernatural entities and phenomena do not exist.”

As you know if you’ve read this site before, I don’t adhere to the view that science should be wedded a priori to either of these views.  Although we do use the methods of reason, experimentation, replication, and so on to study phenomena in nature, we aren’t limited to studying purely natural phenomena—that is, unless, you define “natural phenomena” as those amenable to scientific investigation, in which case the claim becomes a tautology.

And indeed, scientists have studied “supernatural” or “paranormal” phenomena before, including ESP, intercessory prayer, and so on.

F&B agree, and argue in the paper that science can indeed study supernatural phenomena if one adheres to their definition of the supernatural:

Thus, for the sake of argument, we will adopt a working ‘umbrella’ definition of ‘supernatural’ as referring to entities or phenomena that possess one or more of the following characteristics: (1) They operate in ways that fundamentally violate our current understanding of how the world works, (2) they exist outside the spatiotemporal realm of our universe (though they may still causally interact with our universe), and (3) they suggest that reality is at bottom purposeful and mind-like, particularly in a sense that implies a central role for humanity and human affairs in the cosmic scheme. We neither expect that this definition will encompass all uses of the term, nor do we expect complete agreement on the characteristics we have included under it.

Their paper is a critique of an earlier paper in the journal by Martin Mahner (reference below), which argues that the supernatural is immune to scientific study.

Now some of you will argue, perhaps, that once a phenomenon is studied and confirmed by the methods of science, it must be natural rather than supernatural.  But, as I noted, that’s tautological, and untrue if one defines the “supernatural” as do F&B. Their definition of course includes religious assertions, so that stuff can indeed be studied by science. And it’s undeniably the case that science can and has studied things like PSI phenomena and intercessory prayer.  Science could study other supernatural phenomena, like miracles, rain dances, witchcraft, and so on, so that religious claims are not off limits. According F&B, science studies not what is natural, but what is real, and they prefer the term “ontological realism” to “ontological naturalism”. I agree:

However, we maintain that ontological realism, while it may partly explain the success of science, is a defeasible conclusion of science—one that is arrived at by consideration of the evidence. What makes something ‘real’, and not just a figment of our imagination or a social construction, is that it exhibits a consistent pattern irrespective of (or indeed in spite of) our subjective beliefs, thoughts, biases, or desires. Whether or not there are phenomena that fulfill this criterion is empirically discoverable through science. Ontological realism about the entities described by science is the conclusion of an inference to the best explanation on the basis of the available evidence, not a presupposition of science.

There are two important points here.

First, phenomena traditionally seen as “supernatural” and “religious” clearly fall within the ambit of science. Why is that important? For two reasons. First, it makes religious claims about what is “real” directly amenable to scientific study.  Granted, testing things like the Resurrection is difficult since they’re one-off claims (indeed, that’s why Christianity ultimately rests on that claim rather than other scriptural claims that can be easily refuted), but science has already tested and refuted other religious claims, like the instantaneous creation of life, the Great Flood of Noah, the Exodus from Egypt, the young age of the Earth, the existence of Adam and Eve, and so on. What are those besides supernatural claims?

This makes hash, then, of an important accommodationist argument: science and religion study different things, and science has nothing to say about religion. That’s the trope employed by the National Center for Science Education (NCSE), the National Academy of Science (NAS), and the American Association for the Advancement of Science (AAAS). But—pardon my French—that claim is garbage.  Many theologians (including Haught, Polkinghorne, and Swinburne) argue that religion does indeed make truth claims about reality, and thus these epistemic claims can be addressed by ontological realism.

Accommodationist organizations like the NCSE and NAS argue that science can’t address the supernatural for one reason alone: they want to show that religion and science can coexist harmoniously. If religious claims can be defined as outside the ambit of science, that makes it easier to accommodate them.

This is all very NOMA-esque, but it’s wrong.  Science has, can, and will continue to address the supernatural.  What else was the Templeton-funded study of intercessory prayer (a study, by the way, that showed no effect of prayer)?

I once discussed this issue with Eugenie Scott, head of the NCSE, and she had no response. She kept insisting that science can’t address the supernatural, despite my demonstration to her that it can and does. In fact, her claim is based on politics rather than on science or philosophy: the assertion that science assumes MN is meant to immunize religion from scientific study, and thus keep the faithful happy. And when the faithful are happy, perhaps they’ll join us in opposing creationism.

Second, science has never assumed methodological naturalism as an a priori dictate of how to operate.  Science is simply a method of studying what’s real, and finding the best explanation using observation, prediction, replication, experimentation, and so on. There’s nothing in that method that dictates “study only natural phenomena.”  The fact that we’ve provided natural explanations for what is real is simply a result of using the method, and suggests that there are not in fact any supernatural phenomena. But science could have detected such phenomena had they existed. F&B provide a list:

1. Intercessory prayer can heal the sick or re-grow amputated limbs
2. Only Catholic intercessory prayers are effective.
3. Anyone who speaks the Prophet Mohammed’s name in vain is immediately struck
down by lightning, and those who pray to Allah five times a day are free from disease
and misfortune.
4. Gross inconsistencies are found in the fossil record and independent dating techniques
suggest that the earth is less than 10,000 years old—thereby confirming the biblical
account and casting doubt upon Darwinian evolution and contemporary scientific
accounts of geology and cosmology.
5. Specific information or prophecies claimed to be acquired during near death
experiences or via divine revelation are later confirmed – assuming that conventional
means of obtaining this information have been effectively ruled out.
6. Scientific demonstration of extra-sensory perception or other paranormal phenomena
(e.g., psychics routinely win the lottery).
7. Mental faculties persist despite destruction of the physical brain, thus supporting the
existence of a soul that can survive bodily death.
8. Stars align in the heavens to spell the phrase, ‘‘I Exist—God’’.

Some of you will say that these phenomena could be caused by space aliens and the like, and thus could be “natural” phenomena. But I, for one, would regard some of these as support for religious truth claims (e.g., #2 or #3), and provisional evidence for a divine being.

Because of the repeated success of science in explaining reality as a result of natural and not supernatural phenomena, we have eventually come around to ON as an empirically-based philosophical position: since there’s been no evidence for anything supernatural (as F&B define it), we can provisionally assume that supernatural entities and phenomena do not existAs philosopher Barbara Forrest has pointed out (much to the chagrin of the NCSE, I suspect), ON—she calls it “philosophical naturalism”—is a worldview that’s grown out of the repeated application of science, and not from a priori rumination. ON is thus a coherent worldview that can be justified from experience, not from philosophical premises.

Finally, F&B note (and again I agree) that claiming that the supernatural is off-limits to science, while seemingly useful for accommodationism, is actually inimical to science in an important way. That’s because the program of intelligent design creationism (ID) includes criticizing scientists for being “close minded” by ruling the supernatural out of court.  We scientists, they say, are biased by our adherence to MN, and thus sworn to ignore the supposed evidence for intelligent design. (This argument is also made by advocates of paranormal phenomena like ESP.)

F&B’s claim, and mine, is that we shouldn’t rule the supernatural out on first principles. Creationism and its gussied-up cousin ID shouldn’t be dismissed because they invoke the supernatural, but simply because there is no evidence for them. After all, it’s theoretically possible that all life appeared in one instant six thousand years ago and has remained unchanged ever since. That’s a religious view, but also a scientific one. And it’s wrong.

I’ll give F&B the last word:

Our examination of the scientific testability of supernatural hypotheses and, more generally, of the issue of whether or not science presupposes ON has direct implications for science education policies. If, as we have argued, the scientific enterprise does not require an a priori commitment to methodological or metaphysical presuppositions, in particular Mahner’s ‘nosupernature’ principle, then scientists and science educators should not reject supernatural explanations out of hand. Rather, they should be rejected on the grounds that they fail to satisfy general criteria of good explanations in science. For instance, Evan Fales writes:

The reason that ID is not good science is not because it invokes a supernatural creator. ID is not good science because the empirical arguments it provides fail on their merits—e.g., because the criteria for irreducible (or ‘‘specified’’) complexity are defective, question-begging, or not demonstrably applicable to any known organism. (Fales 2009)

Thus, ID should not be taught in science classes as an alternative to Darwinian evolution not because it may make reference to a supernatural designer, but rather because its claims do not meet the standards of good explanations (see also Clark 2009; Laudan 1982). In agreement with previous authors (Martin 1994), we believe that teaching science students how to think critically and how to evaluate hypotheses according to the criteria of good scientific explanations (perhaps using the Bayesian and information-theoretic frameworks outlined above) is as important as teaching them what to think. Accordingly, except for the purpose of teaching critical thinking skills and the history of scientific thought, science educators need not waste their (and their students’) time considering discredited theories such as old earth creationism, phlogiston, disease as due to demonic possession, dowsing, psychic surgery, spiritualism, psi, flat earth theory, homeopathy, astrology, phrenology, or Ptolemaic astronomy. Again, rejection of these theories is not based on a priori methodological or metaphysical presuppositions of science, but on the grounds that they make predictions that conflict with the available evidence or they are unparsimonious.

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Fishman, Y. I. and M. Boudry. 2013. Does science presuppose naturalism (or anything at all)? Science & Education, published online, DOI 10.1007/s11191-012-9574-1.

Mahner M. 2012. The role of metaphysical naturalism in science.  Science & Education 21:1437-1459.

Dan Dennett on the BBC today

April 1, 2013 • 4:34 am

I was asleep during the first airing of this HARDtalk show at 8:05 GMT today, but you can hear it rebroadcast on the BBC World Service, here, at 19:05 GMT. That’s 20:05 London time, I think, as British clocks went an hour forward last night to British Summer Time. In the US it will be at 15:05 EST, or 3:05 PM.

It’s also archived, so you can listen any time at the link for one week.

The BBC’s blurb:

Stephen Sackur speaks to Daniel Dennett, a philosopher who applies Darwinian evolutionary theory not just to species, but to ideas and religious beliefs. Dennett believes religion has outlived its usefulness, hampers rational thought and damages our species. Along with Richard Dawkins and the late Christopher Hitchens, Dennett is seen as a founding father of the new atheism. But do humans want to live in a world where atheism rules and religion is dead?

If this is a correct characterization of what Dan will say, then he doesn’t think that religion is a net good in the modern world, although some on this site have claimed otherwise.

h/t: SGM

Start-of-quarter boots

April 1, 2013 • 4:32 am

Today’s the first day of spring quarter, the 10-week run to the end of the academic year.  This quarter I’ll be teaching a graduate seminar on speciation (my own area of research)—a reading-and-discussion course that meets once a week.

That requires some fancy footwear, and forgive me, Ceiling Cat, for the animal I have on my feet:

boots 2

Obama’s Easter message: he ain’t no atheist

March 31, 2013 • 11:00 am

Well, I freely admit that I was wrong when I speculated, before the last election, that Barack Obama was an atheist.  I wasn’t going on much, to be sure, but over the last few years he’s shown no signs of heathenosity. In fact, his goddishness seems to be increasing, as we can see in the Easter message he issued this weekend. You can watch the video on ABC News, but I really cringed when I heard our President talk about Jesus and his resurrection. It was painful!

I’ve put in bold every statement that is factually incorrect.

Statement by the President on Easter Weekend:

For millions of Americans, this is a special and sacred time of year.

This week, Jewish families gathered around the Seder table, commemorating the Exodus from Egypt and the triumph of faith over oppression. And this weekend, Michelle, Malia, Sasha and I will join Christians around the world to celebrate the Resurrection of Jesus Christ and the hopeful promise of Easter.

In the midst of all of our busy and noisy lives, these holy days afford us the precious opportunity to slow down and spend some quiet moments in prayer and reflection.

As Christians, my family and I remember the incredible sacrifice Jesus made for each and every one of us – how He took on the sins of the world and extended the gift of salvation. And we recommit ourselves to following His example here on Earth. To loving our Lord and Savior. To loving our neighbors. And to seeing in everyone, especially “the least of these,” as a child of God.

Of course, those values are at the heart not just of the Christian faith; but of all faiths. From Judaism to Islam; Hinduism to Sikhism; there echoes a powerful call to serve our brothers and sisters. To keep in our hearts a deep and abiding compassion for all. And to treat others as we wish to be treated ourselves.

That’s the common humanity that binds us together. And as Americans, we’re united by something else, too: faith in the ideals that lie at the heart of our founding*; and the belief that, as part of something bigger than ourselves, we have a shared responsibility to look out for our fellow citizens.

So this weekend, I hope we’re all able to take a moment to pause and reflect. To embrace our loved ones. To give thanks for our blessings. To rededicate ourselves to interests larger than our own.

And to all the Christian families who are celebrating the Resurrection, Michelle and I wish you a blessed and joyful Easter.

God bless you. And may God continue to bless the United States of America.

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*Not religious ideals, as Obama implies!