Collins to resign from BioLogos Foundation

July 16, 2009 • 11:46 am

Some of us have called for Francis Collins to resign from the woo-laden BioLogos Foundation before taking up directorship of the National Institutes of Health. Not that he heeded our call or anything, but he’s gonna step down.  Let’s hope this leads the whole ghastly foundation to crumble.

From an article in the latest Nature:

The BioLogos Foundation has confirmed that Collins would step down from his role there before taking up the reins at the NIH. It’s the right move, says Varmus. “Discussion about the foundation and his involvement with it could readily become a distraction from the business of running the NIH,” he told Nature.

Sean Carroll on the nature of science

July 16, 2009 • 7:22 am

Over at Cosmic Variance, Sean Carroll (the physics one) has a nice essay on the nature of a scientific question.  He begins with a discussion of the empirical content of religious beliefs, which some (including journalist Jeremy Manier, who comments on this blog) seem to find unimportant or irrelevant in discussing the compatibility of science and faith:

Some people would prefer to define “religion” so that religious beliefs entail nothing whatsoever about what happens in the world. And that’s fine; definitions are not correct or incorrect, they are simply useful or useless, where usefulness is judged by the clarity of one’s attempts at communication. Personally, I think using “religion” in that way is not very clear. Most Christians would disagree with the claim that Jesus came about because Joseph and Mary had sex and his sperm fertilized her ovum and things proceeded conventionally from there, or that Jesus didn’t really rise from the dead, or that God did not create the universe. The Congregation for the Causes of Saints, whose job it is to judge whether a candidate for canonization has really performed the required number of miracles and so forth, would probably not agree that miracles don’t occur. Francis Collins, recently nominated to direct the NIH, argues that some sort of God hypothesis helps explain the values of the fundamental constants of nature, just like a good Grand Unified Theory would. These views are by no means outliers, even without delving into the more extreme varieties of Biblical literalism.

Carroll then clarifies what he sees as the main endeavor of scientists; the construction of theories:

The definition of theory is also occasionally troublesome, but the humble language shouldn’t obscure the potential reach of the idea: whether we call them theories, models, hypotheses, or what have you, science passes judgment on ideas about how the world works.

And that’s the crucial point. Science doesn’t do a bunch of experiments concerning colliding objects, and say “momentum was conserved in that collision, and in that one, and in that one,” and stop there. It does those experiments, and then it also proposes frameworks for understanding how the world works, and then it compares those theoretical frameworks to that experimental data, and — if the data and theories seem good enough — passes judgment. The judgments are necessarily tentative — one should always be open to the possibility of better theories or surprising new data — but are no less useful for that.

He says this about multiverse (multiple-universe) “theories”, which theistic evolutionists like Kenneth Miller dismiss as “Hail Marys,” desperation passes thrown out by scientists to explain why physical constants appear to be “fine tuned” for the existence of life. Here is what Miller says about multiverses in his book Only a Theory:

Believers . . . are right to remind skeptics and agnostics that one of their favored explanations for the nature of our existence involves an element of the imagination as wild as any tale in a sacred book: namely, the existence of countless parallel simultaneous universes with which we can never communicate and whose existence we cannot even test. Such belief also requires an extraordinary level of “faith” and the nonreligious would do well to admit as much.

In fact, multiverses are not something concocted by scientists to save their cookies; they grow naturally out of some theories of physics.  As Carroll argues:

The same logic applies, for example, to the highly contentious case of the multiverse. The multiverse isn’t, by itself, a theory; it’s a prediction of a certain class of theories. If the idea were simply “Hey, we don’t know what happens outside our observable universe, so maybe all sorts of crazy things happen,” it would be laughably uninteresting. By scientific standards, it would fall woefully short. But the point is that various theoretical attempts to explain phenomena that we directly observe right in front of us — like gravity, and quantum field theory — lead us to predict that our universe should be one of many, and subsequently suggest that we take that situation seriously when we talk about the “naturalness” of various features of our local environment. The point, at the moment, is not whether there really is or is not a multiverse; it’s that the way we think about it and reach conclusions about its plausibility is through exactly the same kind of scientific reasoning we’ve been using for a long time now. Science doesn’t pass judgment on phenomena; it passes judgment on theories.

Carroll then explains why certain religious claims are indeed empirical claims about the real world, and in that sense are scientific:

Now let’s turn to a closely analogous question. There is some historical evidence that, about two thousand years ago in Galilee, a person named Jesus was born to a woman named Mary, and later grew up to be a messianic leader and was eventually crucified by the Romans. (Unruly bloke, by the way — tended to be pretty doctrinaire about the number of paths to salvation, and prone to throwing moneychangers out of temples. Not very “accommodating,” if you will.) The question is: how did Mary get pregnant?

One approach would be to say: we just don’t know. We weren’t there, don’t have any reliable data, etc. Should just be quiet.

The scientific approach is very different. We have two theories. One theory is that Mary was a virgin; she had never had sex before becoming pregnant, or encountered sperm in any way. Her pregnancy was a miraculous event, carried out through the intervention of the Holy Ghost, a spiritual manifestation of a triune God. The other theory is that Mary got pregnant through relatively conventional channels, with the help of (one presumes) her husband. According to this theory, claims to the contrary in early (although not contemporary) literature are, simply, erroneous.

There’s no question that these two theories can be judged scientifically. One is conceptually very simple; all it requires is that some ancient texts be mistaken, which we know happens all the time, even with texts that are considerably less ancient and considerably better corroborated. The other is conceptually horrible; it posits an isolated and unpredictable deviation from otherwise universal rules, and invokes a set of vaguely-defined spiritual categories along the way. By all of the standards that scientists have used for hundreds of years, the answer is clear: the sex-and-lies theory is enormously more compelling than the virgin-birth theory.

Finally, he goes into the methodological naturalism/philosophical naturalism distinction that some people, including Mooney and Kirshenbaum in their book Unscientific America, use as a stick to beat those mean atheists. As Russell Blackford has shown, this distinction is really a red herring in the discussion about whether science and faith are compatible.

Could science, through its strategy of judging hypotheses on the basis of comparison with empirical data, ever move beyond naturalism to conclude that some sort of supernatural influence was a necessary feature of explaining what happens in the world? Sure; why not? If supernatural phenomena really did exist, and really did influence things that happened in the world, science would do its best to figure that out.

It’s a nice piece, and I doubt that anyone could construe it as “militant” or “shrill”. Go read the whole thing.

Recommended reading: fiction

July 15, 2009 • 3:16 pm

No, it’s not science, but I’ve been meaning for a while to put up a short list of fiction that I’ve enjoyed and want to recommend.

The Raj Quartet (1966-1975) by Paul Scott.  This, I think, is the greatest semi-obscure work of English-language fiction of the 20th century.  It’s a series of four novels, and a sequel (Staying On, 1977), about the end of the British occupation of India.  Like A Passage to India, its centerpiece is a purported case of rape, limning the ambiguous and difficult relationship between India and Britain. You may have seen the BBC television adaptation, The Jewel in the Crown (also the title of one of the novels). If you’re a fan of luscious Fitzgeraldian prose and finely-woven plot, this is for you.   Staying On won the 1977 Booker Prize. This is a great book to take on a long trip.

Life of Pi (2001) by Yann Martel.  Another Booker winner (2002), it’s a must-read if you love animals, biology, and fiction.  I can’t say too much about this one because I’m recommending it as summer reading in an upcoming issue of Nature. You won’t be disappointed.

Blood Meridian (1985) by Cormac McCarthy.  This “Western” (and I use the term loosely), set in the mid-19th century, is the story of a young runaway who joins a gang of Indian hunters, and their bloody travels along the Texas border.  It’s dense and violent, and the prose is hypnotic. When you open a McCarthy book, you are immediately thrust into a unique and mesmerising world that you’ll either love or hate.  McCarthy’s Border Trilogy, three novels written later (and also set in Texas/Mexico), are nearly but not quite as good as Blood Meridian.

Anything by Geoff Dyer, a writer whom I recently discovered. Dyer is a fantastic writer with an amazing range. His jazz/fact/fiction novel, But Beautiful, is a must if you love jazz, and his small collection of reviews and other nonfiction, Anglo-English Attitudes: Essays, Reviews, Misadventures, is a good introduction to his breadth.

Pro-intelligent-design editorial in Boston Globe

July 15, 2009 • 1:12 pm

Stephen Meyer, young-earth creationist and Discovery Institute macher, has published a pro-intelligent-design piece, “Jefferson’s Support for Intelligent Design,” in today’s Boston Globe.  It’s largely an argument from authority, noting that Jefferson imputed the structure of the Universe to design:

“It is impossible, I say, for the human mind not to believe that there is, in all this, design, cause and effect, up to an ultimate cause, a fabricator of all things from matter and motion.’’

(I’d love to see that quote in context.)  The authority argument is combined with the same tired old assertions about how natural selection could never have produced the “digital information” represented by the DNA code:

This discovery has made acute a longstanding scientific mystery that Darwin never addressed or solved: the mystery of how the very first life on earth arose. To date no theory of undirected chemical evolution has explained the origin of the digital information in DNA needed to build the first living cell on earth. Yet modern scientists who argue for intelligent design do not do so merely because natural processes have failed to explain the origin of the information in cells. Instead, they argue for design because systems possessing these features invariably arise from intelligent causes.

DNA functions like a software program. We know that software comes from programmers. Information – whether inscribed in hieroglyphics, written in a book, or encoded in a radio signal – always arises from an intelligent source. So the discovery of digital code in DNA provides a strong scientific reason for concluding that the information in DNA also had an intelligent source.

Design is an inference from biological data, not a deduction from religious authority. Jefferson said just that, and based his political thinking on it. The evidence for what he presciently called “Nature’s God’’ is stronger than ever.

Is a 6,000-year-old Earth also an “inference from geological data”?

This God-of-the-gaps argument for DNA has been addressed by evolutionists many, many times.  See, for example, Dawkins’s most recent books or Ken Miller’s Only a Theory.

It’s amazing, really, that a paper with the gravitas of the Globe would publish such a piece of tripe.  First of all, the argument is wrong.  Second, it’s not new.  Surely someone at the Globe must recognize that the appearance of design does not demonstrate the occurrence of design.  Then again, maybe not.

Note: I stand corrected–Stephen Meyer is not a young earth creationist. I was thinking of his Discovery Institute colleague Paul Nelson, whom I debated a while back.  My apologies to Mr. Meyer for attributing to him a lunatic idea of his colleague.

Unscientific America etc. etc.

July 15, 2009 • 7:28 am

Just a note: I’ll post a full review of UA in early August, as exigent circumstances require me to hold off on posting about this for a while.   In the interim, don’t burn yourself out!

And the quote of the week comes from commenter Ray Moscow (#25 on the “Athiests are funnier” thread):

I’ve never understood why coddling religious beliefs is supposedly “respecting” the believers.  Isn’t it rather treating them like mentally deficient people?

Atheists are funnier

July 14, 2009 • 1:30 pm

Over the past few days I’ve noticed a difference between the posts on “atheist” blogs and those on “accommodationist” blogs:  the people who comment on atheist blogs seem funnier.   While both sides defend their turf with ardor, I find myself chuckling more at the atheist posts: they seem to use humor and sarcasm more often, while the faitheists/Muzzle-ems/godlycoddlers/credophiles (contest winner determined in a few days) seem dour and unfunny.  Granted, this could simply reflect my biases, but it’s interesting that at least one other person, who has posted over at Butterflies and Wheels (comment by “G”), has noticed this too.  He/she has a fairly perspicacious analysis of it:

. . . A sense of humor is at least partly about having perspective: Much humor relies on a very particular kind of social intelligence, an ability to see things from multiple points of view simultaneously. Rhetorically effective humor — especially satire — is very dependent on this component of humor. One must genuinely understand another perspective to effectively satirize it — and to be a truly brilliant satirist, one must be able to see how that perspective appears to yet a third perspective, a sort of conglomerate or average person’s view that allows one to craft satire that has broad appeal. To satirize a person or group or institution, one must be able to portray it such that its character rings true but that also reveals its absurdity in a way that almost anyone can see.

To my mind, what the accommodationists have in common is a poorly-developed faculty for seeing things from the perspectives of others. They profess to have empathy with believers who feel their world-view threatened by science, but most of what they say about believers seems to belittle or infantalize believers rather than respecting or understanding their perspective. Worse yet, they take the responses of believers purely at face value with no allowance for the perspective that the believers occupy: Believers are offended, so those pesky militant atheists must in fact be terribly rude and offensive. . .

engrish-funny-titan-uranus