Wednesday: Hili dialogue

December 19, 2018 • 7:00 am

Well, it’s Wednesday, December 19, 2018, and less than a week for the big Coynezaa celebration. It’s National Hard Candy Day.  Wikipedia says it’s also Mitch Marner Day in Canada, but I can’t find any reason that Marner should be celebrated today (the hockey player was born on on May 5), nor whether there even really is a real Mitch Marner Day.

On to history. On this day in 1606, the three ships Susan ConstantGodspeed, and Discovery left England, carrying the settlers who founded the first of America’s thirteen colonies at Jamestown, Virginia.  On this day in 1777, George Washington and his Continental Army took up winter quarters at Valley Forge Pennsylvania.  About 2,000 soldiers died that winter of disease, cold, and malnutrition. On December 19, 1924, the very last Rolls-Royce Silver Ghost was sold in London, England. Look at this lovely car!

On that same day, the German serial killer Fritz Haarmann was sentenced to death for a murdering at least 24 men and boys in a gruesome manner. He was beheaded in April of 1925.  On December 19, 1932, the BBC World Service began broadcasting as the “BBC Empire Service.” Exactly 40 years later, the last manned flight to the Moon, the Apollo 17, returned its three astronauts safely to Earth.

On this day in 1998, Bill Clinton was impeached by the U.S. House of Representatives. He was the second President to be impeached; do you know the other? And maybe there will be a third (fingers crossed).  On December 19. 2001, the world’s highest recorded barometric pressure—1085.6 hPa (32.06 in Hg—was recorded at Tosontsengel, Khövsgöl, Mongolia.

Finally, this is a day that will live in infamy, for exactly two years ago the Electoral College of the U.S. voted, confirming Donald Trump as the 45th President-Elect.  OY!

Notables born on this day include Fritz Reiner (1888), Jean Genet (1910), Édith Piaf (1915), Cicely Tyson (1924), Phil Ochs (1940), Richard Leakey (1944), Ayssa Milano (1972), and Ronan Farrow (1987).

This is my favorite Edith Piaf song, “Les Amants d’un Jour”. It’s about two lovers who commit suicide in a hotel, and is both beautiful and moving. You can see the original lyrics and translation here. And if you want to know why she was so famous, have a listen. I like this much better than her famous “Non, je ne regrette rien.”

Those who bought the farm on this day include Emily Brontë (1848), Robert Andrews Millikan (1953; Nobel Laureate), and Robert Bork (2012).

Meanwhile in Dobrzyn, Hili knocked Magorzata’s coat to the floor and then sat on it. Caught, the feline editor dissimulated:

A: Hili, this coat was lying on the bench under the mirror.
Hili: Yes, but it escaped and now I’m guarding it so it won’t go any farther.
In Polish:
Ja: Hili, ten płaszcz leżał pod lustrem!
Hili: Tak, ale uciekł i teraz go pilnuję, żeby nie poszedł gdzieś dalej.

A few LOLs, as they say. The first came from Reader Diana MacPherson:

And kitties:

Ants encounter what is probably a sugar solution. Good to the last drop!

A tweet from Steve Stewart-Williams (not upsetting!).  Dinosaur wins!

Tweets from Grania. The first is from an Irish wag:

This photo is unspeakably sad in several ways:

There’s something stirring about a black cat with a featureless face—except for those Coke-bottle eyes:

https://twitter.com/StefanodocSM/status/1074604175399493633

An interspecies friendship: felid and sciurid, from The Dodo, of course:

Tweets from Matthew: I’m not sure if that’s a real skull, but I bet it keeps predators away!

This could come in handy:

Another bizarre interspecies interaction. I encountered my first Eurasian hoopoe (it has the wonderful Latin binomial Upupd epops) decades ago on the grounds of the Taj Mahal. I was astounded: I didn’t know this strange-looking bird existed.

I’m not sure what breed of cat Klaus is, but he’s good with the stinkeye:

 

My origami duck

December 18, 2018 • 2:45 pm

Reader Robert Lang, one of the world’s best practitioners of origami (see my post from the KentPresents festival and Robert’s video here) saw my post the other day about how much I missed my ducks. And this morning a box arrived with a beautiful origami duck inside, along with Robert’s statement that “perhaps the enclosed will provide a reminder of the good times you [and Honey] had together and hopes for further good times next year!”

How sweet, and look at the nice origami duck! On the bottom is Robert’s seal which, he says, “is my name in English (top row) and Japanese (bottom row). It’s an ambigram, so it’s the same if you rotate it 180°.

It now sits atop my computer, reminding me of my best feathered girl:

 

Robert’s website, which shows many of his stupendous creations, is here, and if you want something special, he takes commissions.  Thanks, Robert!

Words and phrases that need to get off my lawn

December 18, 2018 • 1:45 pm

From time to time I put up words or phrases that grate on me, and then readers can vent their gripes as well. Note that yes, I know that language evolves. So does food, but you don’t have to like neologisms, just as you don’t have to like nouvelle cuisine (I don’t).

Here are a few words or phrases that have recently made my toes curl:

“sesh” for “session”. This is part of the trend of looking cool by shortening words, like saying, “I’m having dinner with the fam”, to denote “family”.

“Flip” for “change”. Yes, I know this is ubiquitous, but it still bothers me to hear that someone “flipped a House seat” or the like. Why? I’m not sure.

“At first blush”. Yes, the Oxford English Dictionary defines “blush” as “a glance, glimpse, blink or look”. But people use “at first blush” to sound all breezy and fancy, just as they use “sea change” for “change”. Why not “at first glance”? The word “blush” most often means reddening of the complexion these days, and so the phrase is awkward and even pretentious.

“Rom-coms” to mean “romantic comedies.” Don’t get me started on this one. People use it for one reason only: to sound hip. But the “o” in “romantic” isn’t pronounced the way the “o” is in “comedies,” so a proper pronunciation wouldn’t rhyme, but would sound like “roam-calms”. And that’s dreadful.

Weigh in below; it’s good self-care to vent about language!

Burned out—before doing any work

December 18, 2018 • 12:45 pm

Trying to get attention all the time is hard and not cute! And the lady apparently doesn’t know how to chill, so she gets even more publicity by crowdsourcing her leisure:

And this is a real gem:

Well, as HuffPo might say (but wouldn’t), “AoC needs a face mask and Twitter isn’t having it.”

My suggestion for the incumbent Congresswoman:

A large new salamander from the United States

December 18, 2018 • 11:20 am

by Greg Mayer

Sean Graham, Richard Kline, David Steen, and Crystal Kelehear have just published a description of a new species of salamander from the Gulf Coast of Alabama and Florida (reference at bottom). It’s quite a handsome beast, with bold reticulations and an almost decorative frill of external gills.

(From paper): A) Siren reticulata paratype specimen captured in Okaloosa County, Florida. (B) Location of Siren reticulata captured in 2009 by D. Steen and M. Baragona. (C) The type locality of Siren reticulata, Walton County, Florida.

 

Photo by Pierson Hill, from the New York Times; another photo by Hill is in the paper. If it’s the same animal photographed by Hill for the paper, this is not one of the paratypes.

It’s a species of siren, a type of permanently aquatic salamander that lacks hind legs and has three pairs of external gills. There are, with this new one, three species known in the genus Siren, all from the southeastern United States. The new species stands out for three reasons.

First, it’s a genuinely new discovery, not just elevating to species status a previously known subspecies or population of some other species. The new species, Siren reticulata, is at least broadly sympatric with both the Lesser Siren (Siren intermedia) and the Greater Siren (Siren lacertina), and the authors’ genetic analysis show it to be markedly distinct from both of these species. It thus seems to be a “good” biological species. Much of the “increase” in biodiversity these days, especially in biologically well-known regions such as North America, comes from changes in taxonomic rank, not actually finding a previously unknown form.

Second, it’s awfully large for a previously unknown species: around 60 cm total length, and that’s based on a sample of just 7 individuals used in the description. Again, this stands out because the beast is from North America, where there are lots of new species of small animals to be described, but not so many largish ones. It’s bigger than the Lesser Siren, but not as big as the Greater Siren (which gets up to a record size of about 1 m in total length). Of course, it’s likely that the new siren grows larger than can be judged from just 7 specimens.

Third, this is a sort of success story for cryptozoology. The “leopard eel” was at first only hinted at, but eventually was shown to exist. The existence of it was first intimated by Robert Mount, who, in his The Reptiles and Amphibians of Alabama (1975), had this to say about a siren he included in his discussion of the Greater Siren:

A siren tentatively assigned to S. lacertina collected in the Fish River in Baldwin County does not conform [to the description above]. This specimen, which has 39 costal grooves and is 520 mm long, has a silvery gray ground color. The back, sides, and tail are profusely marked with conspicuous dark gray spots and vermiculations. The venter is unmarked. Additional specimens from that locality, as well as some localities to the east, will be needed to determine whether the specimen on hand is correctly assigned to species.

A few other specimens over the years apparently sparked some interest, but it was not till Steen caught one in 2009 in Florida that serious work began, and now Graham, Steen, and colleagues have been able to confirm that there is a new species, and Mount’s suspicious specimen belongs to it—so good on ya, mates, to Graham and colleagues for solving a decades-old mystery! The case fits a classic cryptozoological scenario: a new animal is reported on insufficient evidence, stories and reports continue to come in, and then, finally, proof is brought to light—in this case, 7 salamanders, along with their attendant morphological and genetic data. I’m not sure if cryptozoologists will embrace this discovery, as they prefer their ‘cryptids’ (unknown animals) to be big, but it is big for a salamander, and a big one for the U.S.

As a common name, the authors propose “Reticulated Siren”, dismissing the name “Leopard Eel”, by which it was apparently known informally (perhaps when it was still just a cryptid). (Large aquatic salamanders with reduced legs are often called “eels” in the southern U.S.) If “Leopard Eel” is a genuine vernacular name, then I would suggest that that name be used. Common names should be just that: part of the language used by people who actually know the species. Standard English names (which many birders and some herpers have a passion for) are fine, but they should not be mistaken for common or vernacular names. Perhaps “Leopard Siren” would be an appropriate middle ground to serve as both type of name.

___________

Graham S.P., R. Kline, D. A. Steen, and C. Kelehear. 2018. Description of an extant salamander from the Gulf Coastal Plain of North America: the Reticulated Siren, Siren reticulata. PLOS ONE 13(12): e0207460.

Mount, R.H. 1975. The Reptiles and Amphibians of Alabama. Auburn University Agricultural Experiment Station, Auburn, Alabama.

Creationist paper gets into a Springer journal

December 18, 2018 • 9:45 am

Googling the title of the paper below so I could find it on the Internet, I see that at least one evolutionary-biology website has posted about it. I’m not going to read what it said until after I post this, as I don’t want to repeat its ideas. But if you have the stomach, have a look at the paper below, published in Springer’s International Journal of Anthropology and Ethnology, which I assume is a fairly respectable journal as it’s published by the money-hungry but scientifically credible Springer firm.

The author of the paper, Sarah Umer, is listed as being in the Department of Visual Arts & Graphic Designs at the Institute of Visual Arts & Designs at the Lahore College for Women University in Lahore, Pakistan. Okay, well, that’s not a ringing endorsement of her expertise, but, as always, it’s the content that’s important.

And the content is dire: this is a straight-up creationist paper, impugning the evidence for evolution, arguing for human separatism from the rest of the planet’s species, and claiming that modern humans (yes, H. sapiens sapiens, not Neanderthals or any other species of Homo), as well as other species, appeared suddenly and fully formed about 50,000 years ago. Yep, that’s Genesis-style “instant appearance” creationism, though Umer appears to be somewhat of an old-earth creationist.

I’ll give some quotes from the paper, which show that Springer clearly didn’t vet this one, or didn’t vet it properly—even more offensive because the paper is loaded with grammatical errors and misspellings. In fact, I’m going to write to the journal and kvetch about this one.

The abstract itself shows you how bad the writing is. The last sentence, which says that many evolutionists and scientists are also sudden-appearance creationists, is of course a lie (my emphasis):

There is a consensus among evolutionists today that man first appeared in Africa approximately four million years ago. Others counter this theory saying, “… when shall we speak of man as man”? The timeline they give is approximately one million years and to fully understand one million years is still a difficult task.

However, another even better way to understand time and man is to study it in terms of generations. So, keeping in mind that primitive people married and had children early, twenty years will make an average generation. According to this there would be 50,000 generations in a million years. Keeping this in mind if we calculate generations we find that 250 generations back take us to the time when written history began. While, another 250 generations back would take us to the time (10,000 years ago), when cultivation began, and man started settled life. Now we are left with 49,500 generations of men, plus a time span of 990,000 years. Keeping these statistics in mind let us ask the question once more, when should we speak of man as man?

Therefore, this paper attempts not only to understand the timeframe “when we can really call Man? – Man” in light of the so-called history of human evolution but also to understand that if the specie roaming the earth for a million years was truly man’s ancestor, as is claimed by Charles Darwin. Then what took man’s ancestor so long to show signs of development that we only witness in the last 12000 years.

Moreover, while keeping man’s progress under consideration of the last 12000 years, it will further shed light on why there are serious reservations about Charles Darwin theory of human evolution. As many scientists, evolutionists, archeologist and different religious scriptures strongly claim that man came to the earth fully developed and did not evolve from a lesser specie.

Species? Dr. Umer—yes, she got a Ph.D for this stuff—apparently doesn’t know that “species” is a singular and a plural word. She also capitalizes species names in the Latin binomial, as in “A. Anamensis“, and sometimes doesn’t capitalize the names of genera, as in “homo“.  But let’s move on. I’ll give just a few howlers:

The question whether the Neanderthals and modern humans interbred was recently addressed by paleoanthropologists who claim, that there was no interbreeding between the two.

She apparently agrees with this, which of course is wrong: we know there was a fair amount of genetic exchange between H. sapiens sapiens and H. sapiens neanderthalensis, as many modern humans carry Neanderthal genes.  Umer apparently rejects that, probably because she wants modern human beings to have originated de novo, without any of those cootie genes from Neanderthals. Umer also uses out-of-date claims by Darwin, and quotes from someone named Derk V. Ager, to show that all living species were created separately. Using quotes as evidence is a common tactic of creationists. Umer doesn’t address the fossil evidence for intermediates between, say, fish and amphibians, amphibians and reptiles, reptiles and birds, reptiles and mammals, and the sequentially changing morphology of the hominin lineage. Here:

Another important fact that seems to refute the claim of the evolutionists today is that, there are no signs of any intermediate forms found in the fossil records. Charles Darwin, who is known as the father of the theory of evolution, as state in his book, The Origins of Species claims,

“If my theory be true, numberless intermediate varieties, linking most closely all of the species of the same group together must assuredly have existed… Consequently, evidence of their former existence could be found only amongst fossil remains.”(Darwin 1964)

This is of course a prediction from Darwin, not an “important fact.” And we do have those intermediate forms. Is Umer blind? She’s at least blinkered—I suspect by religion.

She goes on with another quote from someone I’ve never heard of (she also drags in Solly Zuckerman, a favorite of creationists):

The fossil records today show few intermediate forms; on the other hand, we see fully-formed living species seem to emerge suddenly without any evolutionary transitional form between them. This lack of factual evidence is enough to back their claim that all living species are created separately, and that life appeared on earth all of a sudden and fully-formed. Derek V. Ager, a famous British evolutionist admits this fact by saying;

“The point emerges that if we examine the fossil record in detail, whether at the level of Orders or of Species, we find – over and over again – not gradual evolution, but the sudden explosion of one group at the expense of another.”(Ager 1976)

Umer even enlists evoutionary biologist Doug Futuyma as a supporter of creationism, showing that she completely misunderstands his book Science on Trial, an excellent anti-creationist book:

The fact that all living species were created separately, suddenly and fully-formed without any evolutionary ancestor is yet again backed by evolutionist biologist Douglas Futuyma, who claimed,

“Creation and evolution, between them, exhaust the possible explanations for the origin of living things. Organisms either appeared on the earth fully developed or they did not. If they did not, they must have developed from pre-existing species by some process of modification. If they did appear in a fully developed state, they must indeed have been created by some omnipotent intelligence.”(Futuyma 1983)

Futuyma is just laying out alternatives here, not favoring creationism. The way Umer uses his quote to back creationism shows that she’s either completely clueless or religously tendentious. I favor the latter given that she quotes the creationist loon Harun Yahya (real name Adnan Oktar, now in prison) to support her thesis!

Keeping all the arguments and counter arguments in mind with respect to the theory of man’s evolution, I shall conclude by quoting a few sentences from Harun Yahya’s book, ‘Fascism: The Bloody Ideology of Darwinism’,

“…the theory of evolution is a claim evidently at variance with scientific findings. The theory’s claim on the origin of life is inconsistent with science, the evolutionary mechanisms it proposes have no evolutionary power, and fossils demonstrate that the intermediate forms required by the theory never existed. So, it certainly follows that the theory of evolution should be pushed aside as an unscientific idea.”(Yahya 2002abc)

Umm. . . how come the reviewers of the paper—if there were any—didn’t catch this?

The last paragraph, which I quote in part below, is another paean to human exceptionalism and manages to invoke the “divine” twice and Yahya three times. I’m not sure whether Umer’s “divine” is God or Allah (probably the latter), but why is this in a scientific journal?

Another thing which is even more important than seeing and hearing abilities is the ‘consciousness’ that man has been blessed with (Yahya 2002abc). It is this consciousness that creates the major difference between man and all other living species. It is this that takes man one step ahead of all others. It is this ability that makes us flee from a fire, but we can go back in the same fire to save someone. It is this ability that helps us to understand and comprehend, that despite of the best of qualities given to us in this world, there are certain things that are still beyond our reach, control and comprehension. Even we humans have limitations, and this concept was well taken and understood even by early man since antiquity. He also knew that he had no control over the elements and there was some “Divine Force” somewhere, which had everything under its control. Hence it would not be wrong to presume here, that it was at this point in time around approximately 50,000 to 40,000 years ago, that the modern man entered the scene, and all the other species predating him were not actually ‘man’, or his ancestors. Hence, man was born a man with the best of qualities and a consciousness to understand the ‘Divine’ which has helped him not only to conquer but also to rule the world.

Okay, here’s a link to another critique, which I’ll now go read: “Creationist paper published in journal” by Adam Benton on the site Filthy Monkey Men.

If you want to write to the journal about this paper, the contact information is below. I’m gonna ask them how it managed to get published:

General enquiries: info@springeropen.com

What I wrote (join me if you’d like!)

Dear Springer,

I am writing to call to your attention to something you probably already know: the December issue of your International Journal of Anthropology and Ethnology has published a straight-out Genesis-style creationism paper by Sarah Umer, “A brief history of human evolution: challenging Darwin’s claim.” (Link is at https://link.springer.com/article/10.1186/s41257-018-0014-2). Not only does the paper make a number of false statements about evolution, and misquotes prominent evolutionists, but also quotes the jailed Turkish creationist loon Adnan Oktar (Harun Yahya) in support of its thesis that humans and all species originated instantly at the behest of the “divine”. The editing is also dreadful: there are grammatical and spelling mistakes throughout. Did anybody whose first language is English even edit the paper?

I would like to know how this paper got published and what review process you used. Are you going to let the paper stand as is? Also, why was it so poorly edited?

This paper is an affront to all evolutionary biologists who do good work, as well as a tremendous embarrassment to Springer, who should have known better.

I would appreciate the courtesy of a reply. In the meantime, I’ve posted a short critique–it would take pages to refute Umer’s misstatments and lies–on my website Why Evolution is True. That link is here: https://whyevolutionistrue.com/2018/12/18/creationist-paper-gets-into-a-springer-journal/

Cordially,
Jerry Coyne
Professor Emeritus
Department of Ecology and Evolution
The University of Chicago

Three nefarious predators before breakfast

December 18, 2018 • 8:30 am

The predatory journals seem quite desperate this holiday season: this morning I got requests from no fewer than three of them importuning me for a scientific paper. The first involves thyroid research, a field in which I was deeply involved (NOT!):

Dear Jerry A Coyne,

Christmas Greetings from – Annals of Thyroid Research and Endocrinology!! 

On the behalf of our Editorial office, we take privilege to inform you that we are in the process of releasing a Christmas issue by the month of December, as we are releasing an Issue for a special occasion we would like to invite you to contribute your valuable articles towards our journal.

We hope that your contribution towards our journal would help to increase the quality of our journal and would help the scientific community to the next level.

We are expecting your quick response.

With Gratitude,

James Williams
Editorial Board Assistant
thyroid@publicationweb.net

***********

Dentistry and Oral Health? Seriously?

Dear Dr. Jerry A Coyne

Greetings for the day…!! [JAC: these people like exclamation marks!!!!]

JDOH (Journal of Dentistry & Oral Health) is an endeavour to promote research, innovation in  Dental research for Journal Publication. It is a scholarly online, open access, peer-reviewed, interdisciplinary, bi-monthly, and fully refereed journal focusing on theories, methods and procedures and relevant fields for Journal Publication.

JDOH is accepting manuscripts for its upcoming edition Volume 5, Issue 1. We are writing this proposal to endorse your research in the particular field.

Journal publication contains research papers which deal with the contemporary issues of international relevance in the education theory, methodology and practice of mankind. It welcomes Scientists, Researchers and Scholars to submit their work in the form of Case Study, Research Papers, Review Articles or Short communications. All manuscripts submitted will undergo evaluation by independent peer reviewers based on initial screening by a subject expert from the large Editorial Board.

More details about the journal available at: http://www.jscholaronline.org/journals/journal-of-dentistry-and-oral-health/jhome.php&nb=sp;

Submit your paper online: http://www.jscholaronline.org/submit-manuscript.php

All the published articles get indexed in internationaly recognized open access repositories considered appropriate for the subject.

After publication, article will be assigned with DOI number and will be indexed in Googlescholar, DOAJ and cite factor. If your article is funded by NIH, it will be indexed in PUBMED within a month after publication.

If this proposal is agreeable to you and does not conflict with your current professional and research interests, please let us know by writing to us as an acknowledgment of you looking forward to publish your wor= k.

With Best Regards
Editorial team
Jscholar Publishers
jdoh@jscholarpublishers.com

***********

This one, at least, references an earlier paper I wrote. I quite like that paper (it was my Presidential contribution to the journal Evolution), but it’s not at all relevant to the Medical Research Archives, and there’s no “research” in that summary paper.  Yes, the author would be me, but no, I won’t consider publishing in this ridiculous journal. I gave Dr. Phiri, and the others above, a strong admonition to leave me alone.

Followup article?

 I am trying to reach the lead author of “Science – religion – and society: the problem of evolution in America”.

Would that be you? I wanted to discuss the idea of working on a followup paper which would provide more up to date information on this topic. I have volunteered to edit the next few issues of the Medical Research Archives, and am currently in the process of planning the content which each issue will feature. Have you or maybe a colleague at University of ChicagoÊ continued in this line of research at all?

The Medical Research Archives is unique in that it all articles are published both in an open access online edition and a subscription print edition. I am pasting a link below to some of our more recent open access articles on PubMed so you may get a sense of the sort of articles we publish.

https://www.ncbi.nlm.nih.gov/pubmed?term=”Medical%20research%20archives”%5BJournal%5D

Is this something you might consider during the next couple of months?

Sincerely,

A. Phiri, M.D.
Medical Research Archives
Phone: 612-524-5565
Online ISSN: 2375-1924
Print ISSN: 2375-1916
PubMed ID: 101668511